Vitis riparia (riverbank grape): 117919064
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Entry
117919064 CDS
T07274
Name
(RefSeq) E3 ubiquitin-protein ligase CHIP isoform X1
KO
K09561
STIP1 homology and U-box containing protein 1 [EC:
2.3.2.27
]
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri04120
Ubiquitin mediated proteolysis
vri04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
117919064
04120 Ubiquitin mediated proteolysis
117919064
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
vri03110
]
117919064
04131 Membrane trafficking [BR:
vri04131
]
117919064
04121 Ubiquitin system [BR:
vri04121
]
117919064
Enzymes [BR:
vri01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117919064
Chaperones and folding catalysts [BR:
vri03110
]
Other chaperones and cochaperones
Others
117919064
Membrane trafficking [BR:
vri04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
117919064
Ubiquitin system [BR:
vri04121
]
Ubiquitin ligases (E3)
U-box type E3
117919064
Multi subunit type E3
STUB1-CHIC2 complex
117919064
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
U-box
TPR_2
TPR_1
TPR_11
TPR_8
TPR_16
TPR_14
TPR_17
TPR_9
ANAPC3
TPR_12
TPR_19
zf-NOSIP
TPR_BSK1_C
HAT_PRP39_N
zf-Nse
Motif
Other DBs
NCBI-GeneID:
117919064
NCBI-ProteinID:
XP_034691997
LinkDB
All DBs
Position
7:10927815..10943423
Genome browser
AA seq
276 aa
AA seq
DB search
MSPTAAKQAEQLRLDGNTYFKKGRFAAAIDAYTEAITLCPNVPIYWTNRALGHRKRNNWT
RVEEDCRRAIQLDSNSVKAHYMLGLALLQREEYAEGVKELEKALDLGRGANPKGYMVEEI
WQELAKAKYMEWEHESTKRSWELQTLKEACETALKEKHLFDSSELEGFLDEIPRSNLEQL
EALDRVFRIAAEADMPTDVPDYLCCKITLDIFRDPVIAPSGLTYEREVLLDHLEKVGKFD
PITREPLSQSQLVSNLAIKEAVQAFLDEHGWAYKTD
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgtctccgacggcagccaaacaagcggaacaactcaggctagatggcaacacttacttc
aagaagggtcgtttcgctgccgcaatcgatgcttatactgaggctattacattgtgccca
aatgttcctatttattggacgaatcgtgccctaggccatcggaaacgcaacaattggacg
agagtggaggaggattgtagaagagctattcaactcgacagcaattctgtcaaggcccac
tacatgttaggacttgcattattacagagggaagaatatgctgaaggagtgaaggaactc
gaaaaggctttggatcttgggagaggtgcaaaccctaaaggttatatggtagaggagatc
tggcaggaacttgcaaaagcaaaatacatggagtgggagcacgaatctaccaagcgctca
tgggaactgcaaactttgaaggaagcctgtgagactgctcttaaagaaaaacatctattt
gatagttctgaactggaaggcttcttagatgagattcctagatccaatttggaacagtta
gaggctctagaccgagtgttcagaatagctgcagaagctgacatgccaactgatgttccg
gactacctatgctgtaaaattacacttgatattttccgcgaccctgtcattgctccaagt
gggcttacatatgagagagaagtgcttcttgaccatctggagaaggtgggcaaatttgat
ccaattacccgagagccacttagtcaatctcagctagtatccaatctggccataaaggaa
gcagtccaagcatttctagacgagcatggatgggcttataaaacagattga
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