Vitis riparia (riverbank grape): 117919065
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Entry
117919065 CDS
T07274
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri00040
Pentose and glucuronate interconversions
vri01100
Metabolic pathways
Module
vri_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
117919065
Enzymes [BR:
vri01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
117919065
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
Motif
Other DBs
NCBI-GeneID:
117919065
NCBI-ProteinID:
XP_034691999
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Position
7:complement(9269641..9271456)
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AA seq
400 aa
AA seq
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MGRLLDISYFLLLFFILIIIILNPSSSATQVYDVKSFGAKPDGLRDSTKAFLNAWAAACA
STASSIIFVPKGRYLLHPVVFSGRYCTSARITILINGTLVAPADYRILGKANNWLSFEGV
SGVSILGGAFDAKGPALWACKAAGNQHCPSGATTLSFTNSNNIMIKRMLSLNSQMFHIVI
NGCSNVRLQGVNIIASGNSPNTDGIHVQRSTNIAIIRSTIRTGDDCISIGPGTKNLWMEG
IECGPGHGISIGSLAKDLEEEGVQNVTVKNAAFTGTQNGLRIKSWARASTGFVKGVHFEG
VTMDNVQSPIVIDQNYCPHNQGCPSQESGVKVSDVTYKGIRGTSATKVAVKFDCSAANPC
TSLRLEDVKLTYTNEDQVAQASCSNAKGKAYGLVQPNSCL
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atggggaggctgttggacataagttattttcttttacttttcttcatcctcatcatcatc
attttaaacccttcttcatctgctactcaagtttacgatgtcaagagttttggagctaaa
cccgatggcctaagggactccaccaaagcattcctcaatgcttgggctgcagcatgtgcc
tccacggcttcctccatcatatttgtaccaaaaggacgctatttgcttcaccctgttgtg
ttttcaggccgatattgtacaagcgcccgcatcacaattctcattaatggaaccctggtg
gctccagctgactaccgcattctcggaaaagctaacaattggctcagctttgaaggagtt
agtggcgtttctatcttgggaggggcttttgatgccaaaggacctgccttgtgggcttgc
aaagctgcaggaaaccaacattgcccaagcggagccacgactctgagctttaccaactcc
aacaacattatgataaagagaatgttatcattaaacagtcagatgttccacattgtcata
aatggctgcagcaatgtgcgccttcaaggagtcaacatcatagcatccggaaacagccca
aacacagacggcattcacgtccagcgttcaaccaacatcgccattatccgctccaccatc
agaactggtgatgactgcatatcaatcggtccaggcaccaagaacttgtggatggaaggc
atcgaatgcggtccaggtcacggcatcagcataggaagcctggccaaggatttggaagaa
gaaggggtccaaaatgtgacagttaaaaatgcagcttttacaggtacccaaaatgggttg
aggattaagagttgggccagggccagcacaggattcgtcaagggggtccattttgaagga
gtcaccatggacaatgtccaaagccccatcgtcatagaccagaactactgtccccataat
caaggttgcccttctcaggaatcaggggtaaaagtgagtgacgtgacatacaagggaatt
cgaggaacatcagccacaaaggttgcagtaaaatttgattgcagtgctgcaaatccatgt
acatccctaagactagaagatgtaaaactaacttacacaaatgaggatcaagtggctcaa
gcatcttgtagcaatgcaaagggaaaggcctatggtttggtccagccaaatagttgtttg
taa
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