Vitis riparia (riverbank grape): 117919104
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Entry
117919104 CDS
T07274
Name
(RefSeq) chloride channel protein CLC-c-like
KO
K05016
chloride channel 7
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
vri01009
]
117919104
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vri04131
]
117919104
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
vri04040
]
117919104
Protein phosphatases and associated proteins [BR:
vri01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
117919104
Membrane trafficking [BR:
vri04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
117919104
Ion channels [BR:
vri04040
]
Chloride channels
Chloride channel (CLC)
117919104
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Voltage_CLC
CBS
Motif
Other DBs
NCBI-GeneID:
117919104
NCBI-ProteinID:
XP_034692072
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Position
7:279727..288270
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AA seq
780 aa
AA seq
DB search
MDGEGSSNHIGGMNDLENEGFLDGKEIERYWSEISEKSMIMYKEPLLTKRMNTTSQIAIV
GANVCSIESLDYEIVENELFKQDWRSRKKAQIFQYVVLKWALALLIGLGTGLVGFFNNIA
VENIAGFKLLLTSDFMSQKKYFKAFAAYASCNIGLATAAAALCAFIAPAAAGSGIPEVKA
YLNGIDAHSILAPSTLFVKIFGSILGVSAGFVVGKEGPMVHTGACIASLLGQGGSRKYHL
TWSWLKYFKNDQDRRDLITCGAAAGVAAAFRAPVGGVLFALEEAASWWRSALLWRTFFTT
AVVAIVLRAFIEYCWTGKCGLFGQGGLIMYDVSAATETYGVPDILAVLFLGVIGGIFGSL
YNYLVDKVLRTYSIINEKGARFKILLVVTICILTTCCSFGLPWFSKCIPCPTDLAVTCST
ESGNFKRFQCQSGYYNDLASLFLNTNDDAIRNLFSTSTRHEFRISSLFIFFAAIYCLGII
TYGIAVPSGLFIPVILAGACYGRLVGRLFASISKLDTGLFALLGAASFLGGTMRMTVSLC
VILLELTNDLLLLPLVMLVLLASKTVADSFNKGVYDQIVKLKGLPYMEAHAEPYMKHLAA
RDVVSGPLVTFSGIEKVGNIMHALRTTGHNGFPVIDEPPFTDAPELCGLVLRSHLLVLLK
GKSFSRNQVHCGGEILRKYAALDFAKAGSGKGVKLEDLNIEEEEMEMYVDLHPITNASPY
TVVETMSLAKAAILFRQVGLRHMCVVPKSQGRPPIVGILTRHDFMPEHILGLYPHLSPHK
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atggatggagaagggagttcgaaccatattggtggtatgaatgaccttgaaaatgaggga
ttcctggatggtaaggagattgagaggtactggtcagagatatcggagaaaagcatgatc
atgtataaagagccgcttctgacaaagaggatgaacactacctcccagattgccattgtt
ggtgctaatgtctgctccattgagagccttgactatgagattgttgaaaatgaactattt
aagcaagactggaggtcaaggaagaaggctcagatatttcagtatgtggtactcaagtgg
gcacttgcacttcttatagggcttggtactggacttgttggcttcttcaacaatattgca
gttgagaatattgctggtttcaaactgctgttgactagtgatttcatgtctcagaaaaaa
tatttcaaggcttttgcagcatatgctagctgcaatataggtttggcaactgctgctgca
gccctttgtgctttcattgctccagcagcagcagggtctggtattcctgaagtgaaagca
tatctcaatggtatagatgctcattcaatattggctccaagtaccctctttgtaaagatt
tttggttccattcttggtgtttctgctggatttgtggtgggtaaggaagggccaatggta
cacacgggtgcttgcattgcctctcttcttgggcagggaggctctcgcaagtatcattta
acgtggagttggctaaaatacttcaaaaatgatcaggacagacgagacttgatcacttgc
ggggctgctgccggggtggctgctgccttccgtgctccagtgggtggtgtcctctttgcc
cttgaagaagcagcttcatggtggcgaagtgctcttctttggaggacatttttcacaaca
gctgtggttgctattgttttgagagctttcatagaatattgctggactggaaaatgtggg
ctattcgggcaaggaggtctgataatgtatgatgtcagtgctgctacagaaacatacggt
gtcccagatatactagcagtactatttctaggagtcattggcggcatttttggaagccta
tacaattatcttgtggacaaggttcttcgaacttatagcatcatcaatgaaaaaggtgcc
cgtttcaaaatattacttgttgttactatctgcatcttgacaacctgttgctcctttggc
ctgccatggttttcaaagtgtataccctgccctactgatctggctgtgacctgctccaca
gaatctggcaactttaaacgcttccagtgccaatcaggttactacaatgacctcgcttcc
ctcttcctgaatactaatgatgatgccattcgcaacctattcagcaccagcactaggcat
gaatttcgtatttccagcctcttcatcttctttgctgccatctactgtcttggcattatc
acgtatggtattgctgttccctccggtctcttcattccagttatactagctggagcttgc
tatggtcgtcttgttgggagactctttgcatctatatctaaacttgatacgggactcttt
gccctccttggagctgcatccttccttggtggcaccatgagaatgacagtttccctgtgt
gtgatcctgctagagcttaccaatgatctactattgctgccccttgtcatgcttgttctc
cttgcctcaaaaacagtggctgatagcttcaacaaaggtgtctatgaccagatagtaaaa
ctgaagggattgccttacatggaggcccatgcagagccctacatgaagcatttggctgca
cgtgatgttgtttcaggtccattggttaccttctctggcattgaaaaggtggggaacata
atgcatgctttgaggactacagggcataacgggttccctgtgattgacgagccgcctttc
acagatgcgccggaactgtgtggacttgtgttgaggtctcatttgcttgttctactaaag
gggaagagtttctctaggaatcaggtgcattgtggaggggagatcttgagaaagtatgca
gcattggactttgccaaggcaggatcaggaaagggggtgaaactggaggatttgaatatt
gaagaggaagagatggaaatgtatgtcgatctccatcctataacaaatgcatctccatac
accgtggttgagacgatgtcgttagcaaaagctgcaattctctttcggcaagtgggcctt
aggcacatgtgtgtggtaccaaagagccaagggaggcctccaattgttggaatcctgaca
cggcacgacttcatgccagagcacatattgggactctaccctcatttgagtcctcacaag
taa
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