Vitis riparia (riverbank grape): 117919168
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Entry
117919168 CDS
T07274
Name
(RefSeq) protein SDA1 homolog
KO
K14856
protein SDA1
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vri03009
]
117919168
Ribosome biogenesis [BR:
vri03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
117919168
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SDA1_HEAT
SDA1_C
SDA1_dom
PAXIP1_C
Motif
Other DBs
NCBI-GeneID:
117919168
NCBI-ProteinID:
XP_034692174
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All DBs
Position
1:complement(6876527..6884271)
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AA seq
848 aa
AA seq
DB search
MRPQHVNSEALSASGRTSEKLSLPALQSKMKCDPEGYESELLLLYSQFNSSLELFQQQAV
FTSISGVDTDPAVAKDLGDRAVFLSHLTPFYPKHLAEFPKQLAQFLRSTARSLPSSLRCH
VAQALILLINRKIVDIGDTLALFLELQTLGDRALRKLAFSHVVHSIKRMNQKHKNEAQNR
ALQNILFPMLQQEDEAQAKRSLITLCDLHRRKVWFDDRTANAICTACFHSSSRIMIAALS
FLLDYEKIEDDDDSDGSSSEDETPQKPQVVLSKGDVYKAHHKGTLSSKKKKKAKLQRVIR
NMKRKQRLSSEKGISNNYSPLNHLKDAQGFSEKLFSRLQTCNERFEVKMMMLKVIARTVG
LHRLILLNFYPFLQKYVQPHQRDVTNLLAAAVQACHDMVPPDAVEPLFKQIVNQFVHDRS
RTEAIAVGLNVVREICLRIPLLMTEDLLQDLVLYKKSHEKAVSTAARSLITLFREICPSL
LIKKDRGRPTDPKAKPKAFGEVNVVSSVPGAELLQHDDDDDDDDDVNDDNSDETGFSDCD
GSHDSDVKFAASDGEQNELDNHNSDLFRKDSTNDVQVAEVAEDEDGNNITDDDSVDVSDD
DDDDDNESGGSGDEDDDEDYDDDDGVSDDVDGEEEEGEREFNGSHKTNDHDDGNDGTGEE
KSKARKRKALDFEGQLNAADSSLRALKRLAGAKMGHAPLESTDGILSNEDFQRIKDLKAK
EEAKFALAQHGLLRKGSDAKSTGFKIPTSDQLSVKRVDPAMLEVNIRKKLSKEERLELVR
AGREDRGKYQARAAVKQKKTGGSSNRQKEHKKAMPLAAKRSKIQKSREVKRKQQRRSGKQ
FRGRKAWK
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atgcggcctcaacacgtgaattcggaggcgctctctgcctccggcaggacctccgagaaa
ctgagcctcccagcgctgcaatccaagatgaagtgtgacccagaaggttacgagtccgaa
ctcctcctcctctacagccaattcaactcctccctcgagctcttccaacagcaagctgtc
ttcacctccatcagcggcgtggacaccgaccccgctgtcgccaaggaccttggcgacagg
gccgtcttcttgtctcacctcaccccattttaccccaaacatctcgctgagttccctaaa
caactcgctcagttcctccgctcaaccgcccgttcgcttccatcgtcgcttcgctgccat
gttgctcaagccctcattcttctcatcaatcggaagatagttgatattggtgacactctt
gcattgttcttggagcttcaaactctcggtgatagggctttgagaaaattggcattttct
catgttgttcatagtatcaagagaatgaaccagaagcataagaatgaggctcagaatcgt
gcacttcaaaacatattgtttccgatgctacagcaagaggatgaagcacaagctaagaga
tcgcttatcacactttgtgatcttcatcgcagaaaggtgtggtttgatgatagaaccgcc
aatgcaatctgtactgcatgttttcattcatcatcgaggatcatgattgctgctttatcc
tttcttcttgactatgaaaagattgaagatgatgatgacagtgatggttcaagcagtgaa
gatgagactccccaaaagcctcaagttgtcctaagtaaaggggatgtttataaggcacac
cataaaggtacactttcaagcaagaagaaaaaaaaggcaaaattgcagcgtgtgattcgt
aatatgaaaaggaagcagcgcctatcatcagaaaaaggcatttcaaataactattcacca
cttaaccatctgaaagatgcgcagggattttctgagaaactattctctcgtcttcaaaca
tgcaatgaacggtttgaggttaagatgatgatgttgaaagtaattgctcgaacagttggg
cttcaccggttgattttactaaatttttatccttttctccagaaatatgttcagccccat
caacgtgatgtcacaaatttacttgcagcggcagttcaggcatgccatgacatggtgcct
cctgatgcggttgaaccactattcaaacaaatcgtaaatcagtttgtacatgatcgttca
cggacagaggctattgctgtgggactgaatgtagtaagggaaatatgtctgcgcatacct
ttgttgatgacagaagacttgctgcaagaccttgttttgtataagaaatcacatgagaaa
gctgtttcaacagcagctcgttcactcattacattatttagagagatttgcccttctctg
ctgattaaaaaagatcgtggacgacctactgacccaaaggcaaagccaaaagcgtttgga
gaagtgaatgttgtcagtagtgttcctggtgctgagttattacaacatgatgatgatgat
gatgatgatgatgatgtgaatgatgacaattctgatgagactggattcagtgattgtgat
ggtagtcatgatagtgatgtgaagtttgctgctagtgatggtgaacaaaatgagctagac
aatcataattctgaccttttcagaaaagatagcactaatgatgtacaagttgcagaagtg
gctgaagatgaagatggcaataatattactgatgatgattctgttgatgtcagtgatgat
gatgatgatgatgacaatgagagcggcggtagtggtgatgaggatgatgatgaggattat
gatgatgatgatggtgtcagtgacgatgttgatggggaagaagaggagggggagagggaa
tttaatggttctcataaaactaatgaccatgatgatgggaatgatggtactggagaagaa
aaatctaaagcaaggaagaggaaggctttggattttgagggacaattgaatgctgctgat
tctagtcttcgggctcttaagagattagcaggggcaaagatggggcatgccccattggaa
tcaacagatggtattctttctaatgaagacttccaacggattaaagacctaaaggcaaag
gaggaagccaaatttgctttggctcagcatgggttgttaaggaaaggctcagatgcaaaa
tcaacaggttttaagattccaacttctgatcagctgagtgttaaacgagtggatcctgct
atgcttgaggttaatataaggaaaaagctaagtaaagaggaaagattggaactggtgaga
gcagggagagaggacagagggaagtaccaggcccgagctgcagtgaaacagaagaagact
ggtggttcgagcaatcgacagaaggaacacaagaaggccatgcctctagctgctaagcga
tccaagatacaaaaatcacgagaggtgaaaaggaaacaacagcgtcgttctggtaaacag
tttcgtgggaggaaagcatggaagtga
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