Vitis riparia (riverbank grape): 117919177
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Entry
117919177 CDS
T07274
Name
(RefSeq) protein SLOW WALKER 1
KO
K14549
U3 small nucleolar RNA-associated protein 15
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
117919177
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vri03009
]
117919177
Ribosome biogenesis [BR:
vri03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
117919177
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP15_C
WD40_Prp19
WD40
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
Beta-prop_TEP1_2nd
EIF3I
WD40_MABP1-WDR62_1st
NBCH_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_CAF1B_HIR1
Beta-prop_SCAP
Beta-prop_WDR19_1st
Beta-prop_TEP1_C
Utp13
WDR54
DUF3848
Motif
Other DBs
NCBI-GeneID:
117919177
NCBI-ProteinID:
XP_034692182
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Position
7:complement(28259759..28261580)
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AA seq
528 aa
AA seq
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MAEPQQALSRTFPVKPKLKAKSKKPSKTPESKYWSSFKSHTIPNLISSITSLSFSPATPH
HFAAAYSTSLTLFNSKTLEPISSISSFKDVVSCASFRSDGLLIAASDHSGLVQVFDVKTR
TALRKLRGHTRPVRLVRYPRSDKLHLFSGGDDAVVKYWDVAAESGVVEFRGHKDYVRCGD
GSPASSELFATGSYDHTVKVWDVRVSNSDAAMKINHGKPVEDVIFLPSGGLIATAGGNCV
KIWDVIGGGKLLYSMENHNKTVTSICVGKIGRDGGEGSEQYRVLSVGLDGYMKVFDYSKF
KITHSMRFPAPLLSIGFSPDCATRAIGTSNGVIFAGKRKVKGEVESGLREFPSLGLMEEP
QRRVLRPSYFRYFHRSQGEKPSEGDYLITRPKKVKIAEHDKLLKKFRHKDAFVSALSGKN
PENVVAVMEELVARKKLLKCVSNLDTEELGLLLAFLHRHSTVPRYASLLMGLTKKVVQMR
AEDIIASDVLKGHIRNLKRSVEEEVRIQQSLQEIQGIISPLLRIAGRR
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atggcggaacctcaacaagcactctccaggaccttcccagtgaagcctaaactcaaagca
aaatccaaaaaaccctctaaaaccccagaatccaagtactggtcgtccttcaaatctcac
accattcccaatctcatctcttccataacctctttatcattctctccggcgacccctcac
cacttcgccgccgcctactccacctccctcaccctcttcaactccaaaactctcgaaccc
atctcctccatctcctccttcaaagacgtcgtttcatgcgcctccttccgctccgatggc
ctcctcatcgccgcctctgatcactccggccttgtccaggtcttcgacgtcaagacccga
acagctcttcgaaagctccgcggtcacactcggccggttcgactcgttcggtacccgcgt
tccgataagctccacttgttctccgggggcgacgatgcagtggtcaagtactgggatgtt
gctgccgagtcaggagttgtggagttccggggccacaaggattatgtccgctgcggagat
gggtcaccggcgagttctgagttgtttgccacggggtcgtatgatcatacggttaaggtt
tgggatgttagagtttcgaattcggatgcagcgatgaagataaatcatgggaaaccggtg
gaagatgtgatcttcttgccgtccggtgggttaattgcaaccgccggaggaaattgtgtg
aagatttgggatgtgattggaggagggaagttgttgtattcaatggagaatcataacaag
actgttacctcaatttgtgtgggtaagattgggagggatggtggtgagggttcagaacaa
tatagggttttgagcgtggggctggatgggtatatgaaggtttttgattactctaagttc
aagataactcattcgatgaggttcccagcaccgcttttatcaattgggttctcgcctgat
tgtgcaacgcgggcaattggtacttcaaatggggttatatttgctgggaagaggaaggtg
aagggggaagttgagagtggcttgagggagtttccaagtttgggtttgatggaggaacca
cagagacgggtactgaggccctcttattttcgatatttccataggagccaaggagagaaa
ccttctgagggggattacctcattacaaggccaaagaaagtgaaaatcgcagagcatgat
aagttgttgaagaagtttaggcataaggatgcttttgtgtctgccttaagtgggaagaac
cctgaaaatgtggtggctgtgatggaggaattggtagcaaggaagaagttgttgaaatgt
gtttcgaatttggatacagaggagcttgggttacttctggcattcttgcataggcattca
actgtgccaagatatgcaagtttgttaatggggttgacaaagaaagtagttcagatgcga
gctgaagacattatagcttctgatgtcttgaagggccatataagaaacctgaagcggtca
gttgaggaggaggttaggatacaacaatccttgcaagagatacaaggtataatttctcct
ttactgaggattgctggaagaagataa
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integrated database retrieval system