Vitis riparia (riverbank grape): 117919259
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Entry
117919259 CDS
T07274
Name
(RefSeq) exopolygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri00040
Pentose and glucuronate interconversions
vri01100
Metabolic pathways
Module
vri_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
117919259
Enzymes [BR:
vri01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
117919259
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
117919259
NCBI-ProteinID:
XP_034692285
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Position
7:complement(27038544..27040883)
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AA seq
415 aa
AA seq
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MAMAIRFVAKAVILLGLALVSCNAQGDPLRDDLRRLLADTGATVFDVTKYGAVADGKTDN
VEAFMKTWLAACHWRGTSTVLIPEGKFLVGQATFEGPCNSPNPIVFEARGTVLAQPDLSE
YPSPEWLMFEDVNQLILKGGGTFDGQGVFAWKYNDCHQNADCQMLPTNLKFNKVNNSVVQ
DITSLDSKSFHYFITNSHNFTAFNLTITAPGNSPNTDGMHLSRCDMVNLSNFTIKTGDDC
ISVGQGSTNINITDVYCGPGHGLSIGSLGKYPNEKDVVGIHVTNCTLNGTTNGARIKTWP
GSPPSQASSIIFQDIVMNSVKNPILIDQKYGSHAGKPSRVKVSDVLYKNLRGTTISKVAV
SLVCSELVPCNGLQLEDIDFTYNGPATFKENLPFSSTCLHANASYVGKQNPPACA
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggccatggcaataagatttgtggccaaagctgtcattctcttgggcttggctttagtc
tcatgcaatgctcagggcgacccgctgcgtgacgatctccgtcgtctccttgctgacact
ggagctacagtttttgacgttacaaaatatggcgccgtcgctgatggcaagactgataat
gttgaggcatttatgaagacatggcttgcagcatgccattggaggggaacgtcgacggtt
ctcatccccgagggaaagttcttggtagggcaagcaacgtttgaagggccatgcaatagc
cctaaccccatagtttttgaggctcgaggaaccgtattggcacagcctgatttgagtgag
tacccttctccagaatggttgatgtttgaagacgtgaatcaattgatacttaagggcgga
ggaacctttgatgggcaaggtgtgtttgcatggaagtataacgattgtcatcagaacgcc
gactgccagatgcttccaactaatctgaaattcaacaaggtgaataactctgtggttcag
gatatcacctccctcgatagcaaatcattccactactttatcaccaattcccataacttt
actgctttcaatctcactattactgcccctggaaacagtccaaacactgacggcatgcat
ctaagccgttgtgatatggtgaatctgtcgaacttcaccattaaaactggcgatgattgc
atctcagttggacaagggagcaccaatattaacattacagacgtgtattgtggcccggga
catggcctcagtattgggagccttggaaagtacccaaatgaaaaggatgtggtagggatt
catgtgactaactgcacattgaatggcacaacaaatggcgcaaggatcaaaacctggcct
ggatcacctccaagtcaagcttcatccatcatcttccaagacatagttatgaacagtgta
aaaaaccccatcctcatagatcagaagtatggttcacatgcaggcaagccatctcgtgtg
aaggtcagcgatgttctttacaagaacctaagggggacaacgatttcaaaagtagcagtg
tccttggtatgcagtgaactggtcccttgtaatgggcttcaactggaggatatcgatttc
acctacaacggcccggcgactttcaaagagaacttgcccttttcatctacatgtttgcat
gcaaatgcgtcctatgtcggcaagcagaacccaccagcttgcgcttag
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