KEGG   Vitis riparia (riverbank grape): 117919377
Entry
117919377         CDS       T07274                                 
Name
(RefSeq) ubiquitin-40S ribosomal protein S27a
  KO
K02977  ubiquitin-small subunit ribosomal protein S27Ae
Organism
vri  Vitis riparia (riverbank grape)
Pathway
vri03010  Ribosome
vri04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:vri00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    117919377
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    117919377
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:vri03011]
    117919377
   04121 Ubiquitin system [BR:vri04121]
    117919377
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:vri04147]
    117919377
Ribosome [BR:vri03011]
 Ribosomal proteins
  Eukaryotes
   Small subunit
    117919377
  Archaea
    117919377
Ubiquitin system [BR:vri04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   117919377
Exosome [BR:vri04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   117919377
  Exosomal proteins of colorectal cancer cells
   117919377
SSDB
Motif
Pfam: ubiquitin Ribosomal_S27 Rad60-SLD Ubiquitin_2 Rad60-SLD_2 Plexin_RBD Dsc3_N DUF2604 UBL_UBAC1 TBK1_ULD OTU1_UBXL Fer2_3 Ubiquitin_5
Other DBs
NCBI-GeneID: 117919377
NCBI-ProteinID: XP_034692448
LinkDB
Position
7:complement(25870291..25871074)
AA seq 156 aa
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKKKKVKLAVLQFYKVDDSGKVQRLRKE
CPNAECGAGTFMANHFDRHYCGKCGLTYVYQKAGGE
NT seq 471 nt   +upstreamnt  +downstreamnt
atgcagatcttcgtgaaaaccctaacgggtaagaccataacccttgaggtggagtcctct
gacaccatcgacaatgtgaaggccaagatccaggacaaggaaggcattcctccggaccag
caacgcctcatattcgccgggaagcagctcgaggacggccggaccctagctgactacaac
atccagaaggagtctaccctccacctggtgctccgcctcagaggtggcgccaagaagagg
aagaagaagacctacacaaagcccaagaagatcaagcacaagaagaagaaggtgaagctc
gccgtgttgcagttctacaaggttgatgactccggcaaggtccagaggctgaggaaggag
tgccccaacgctgagtgtggcgccggcactttcatggccaaccactttgaccgtcactac
tgcggtaagtgtggtttgacttatgtttaccagaaggccggtggtgagtga

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