Vitis riparia (riverbank grape): 117919568
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Entry
117919568 CDS
T07274
Name
(RefSeq) small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial
KO
K06949
ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.-
3.1.3.100
]
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri00730
Thiamine metabolism
vri01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
117919568
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vri03009
]
117919568
Enzymes [BR:
vri01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.100 thiamine phosphate phosphatase
117919568
Ribosome biogenesis [BR:
vri03009
]
Prokaryotic type
GTPases
117919568
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RsgA_GTPase
MMR_HSR1
AAA_29
ABC_tran
nSTAND1
AAA_23
AAA_16
AAA_21
AAA_22
SMC_N
Guanylate_kin
AAA_15
SRPRB
AAA_33
TniB
Adeno_IVa2
AAA_28
RHS
IstB_IS21
AAA_7
AAA_24
Septin
IIGP
Motif
Other DBs
NCBI-GeneID:
117919568
NCBI-ProteinID:
XP_034692642
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All DBs
Position
1:21997203..22002013
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AA seq
487 aa
AA seq
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MPIASTSIFRYSNPSSLLLLRRGAAASFRHLSFVAKHQNPISRKPQNKNLLRAKQTVKHL
SSLSPTLPVNHRPLLSATDAVGMVAAAQANFMRVIVEDSRVADGGGDGDGDGDAVRVGVE
LLCVVRAVLKKIKRRVLVGDKVLVGSIDWVDRRGVIENVFSRKSEILDPPVANVDHLLVL
FAMEQPKLEVYSLTRFLVEAESTGIPITLALNKSELVDEETRVAWKSRLRSWGYGPVFCS
VESKFGLDTLAFSLREQTTVIVGPSGVGKSSLINALRSNHPLINVSSEENNWFDSILGSK
LLEEQRVGEVSVRSGRGKHTTRHVSLLPLSGGGYLADTPGFNQPSLLKVTTQSLAQTFPE
IRKLLSANEPEKCSFNDCLHLGEPGCVVKGDWERYPYYFQLLDEIKIREEFQLRTLGTKR
EGDVRYKTGDMGVKQAEPRLEPKKHRRQSRKRMNQSILDELDDLDDDDSLLDAEGDSILN
EIGNENQ
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgccgatcgcctctacctcaatcttccgctacagcaatccttcctcactcctcctcctc
cgccgtggcgctgctgcctctttccgccacctctcctttgtcgccaaacaccaaaacccc
atctccagaaaacctcaaaacaagaatctcctccgagcaaaacagacagtcaagcacctc
tcctccctctcgccgacgctcccggtgaaccatcgccccctcctgtccgccactgatgcc
gtcggcatggttgctgctgcccaagcaaacttcatgcgagtcatagtcgaagattctaga
gtcgcagacggcggcggcgacggagatggcgatggcgatgccgtcagggttggggttgag
ctgctgtgtgtggtgagagccgtgttgaagaagatcaagaggagggttttggtgggagat
aaggtgttggttggatcgatagattgggtggatcgccggggcgtgattgagaatgtgttc
tcgaggaaatcggagattctggaccctccagtggccaatgtggatcacctgttggtgctt
ttcgcgatggagcagccaaaattggaggtgtattcgcttactcggtttttggtggaggct
gagtccactgggattccgatcacactcgcattgaacaaatcggaactcgtcgacgaagag
acacgagttgcttggaaatcaaggctccgaagttggggctatgggccagttttttgcagt
gttgaatccaagtttggacttgatactcttgcattcagcttgagagaacaaacaactgtg
attgtaggtccaagtggagtagggaagtctagtctcataaatgctttgagaagcaaccac
cctcttattaatgtttcttctgaagagaacaattggtttgattctattttagggagcaaa
ttgttagaagaacagcgtgttggggaagtgtcagtaagaagtgggagagggaagcacact
actcgccatgtatccttacttccgctatctggagggggatatcttgctgatactcctggg
tttaaccaaccaagcttgctgaaagtaacaactcaatctcttgcacagactttcccagag
atcaggaaattgctcagtgctaatgaacctgaaaaatgctcattcaatgattgcttgcat
cttggtgagccagggtgcgttgtgaaaggagattgggaaagatatccatactattttcaa
ctgcttgatgagataaaaatcagagaagaatttcagttgaggaccctgggaaccaaaaga
gagggtgatgtgaggtacaagacaggtgatatgggtgtcaagcaagcagaaccacgactt
gagcctaagaagcacagaagacaatctcgcaagaggatgaaccagtccatcctagacgag
ttggacgaccttgatgatgatgatagcttattagatgctgaaggtgactcgattttaaat
gaaataggcaatgaaaatcagtag
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