Vitis riparia (riverbank grape): 117919593
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Entry
117919593 CDS
T07274
Name
(RefSeq) RING-H2 finger protein ATL74-like
KO
K19040
E3 ubiquitin-protein ligase ATL10/75/76/77/78 [EC:
2.3.2.27
]
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vri04121
]
117919593
Enzymes [BR:
vri01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117919593
Ubiquitin system [BR:
vri04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
117919593
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
FANCL_C
DUF1272
Prok-RING_1
zf-C3HC4_3
zf_RING_Vps8_fungal
zf-RING_4
DUF8112
HCMV_UL139
zf-Nse
DUF6486
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
117919593
NCBI-ProteinID:
XP_034692676
LinkDB
All DBs
Position
8:10817929..10819630
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AA seq
195 aa
AA seq
DB search
MVNPILHHLHHHHHRLLLDTPEPSIVSNGNSTHEAYVNETNFDTNMVIILAALLCALIGA
LGLNSIVRCAMRCSRRLSPESQGQAATGLKKRALRQIPVAVYGPGVEIPATECPICLGEF
VQGEKVRVLPKCNHGFHVRCIDTWLVSHSSCPNCRHSLLERPTTSDAAGEVAPEQPQPNG
STHQGSIVIAVHETS
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atggtgaatccgattcttcatcatcttcatcatcatcatcatcgcctcctgctcgatacg
ccggagccgagcatcgtgtcaaatgggaacagtactcatgaggcttatgtgaacgagacc
aacttcgacaccaacatggtgatcatcctagcagccttgctatgtgctctaataggagca
cttgggctcaactcaatcgtgcgctgcgccatgcgctgcagcagaaggctctccccggag
tcccaggggcaagctgctactggcctcaagaagcgtgctctgcgccaaattccggtagca
gtttatgggcccggagtggagattccggccactgaatgcccaatttgcctgggcgagttt
gtgcagggggagaaggttagggtgttgcccaaatgcaatcatgggttccatgtgaggtgc
atagacacatggctggtgtcacactcatcctgcccaaattgtcgccactcattgcttgag
cgcccaacaacttcagacgcagctggtgaggttgccccggaacagccacagccaaatggg
tccacccaccaaggtagcattgtcattgctgtccatgagacaagttaa
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