Vitis riparia (riverbank grape): 117919720
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Entry
117919720 CDS
T07274
Name
(RefSeq) tubulin alpha-5 chain-like
KO
K07374
tubulin alpha
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri04145
Phagosome
vri04517
IgSF CAM signaling
vri04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
117919720
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
117919720
09142 Cell motility
04814 Motor proteins
117919720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vri03019
]
117919720
03036 Chromosome and associated proteins [BR:
vri03036
]
117919720
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
vri04812
]
117919720
04147 Exosome [BR:
vri04147
]
117919720
Messenger RNA biogenesis [BR:
vri03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
117919720
Chromosome and associated proteins [BR:
vri03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
117919720
Cytoskeleton proteins [BR:
vri04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
117919720
Exosome [BR:
vri04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117919720
Exosomal proteins of other body fluids (saliva and urine)
117919720
Exosomal proteins of colorectal cancer cells
117919720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
117919720
NCBI-ProteinID:
XP_034692849
LinkDB
All DBs
Position
8:complement(21082284..21085134)
Genome browser
AA seq
446 aa
AA seq
DB search
MREVISIHIGQAGIQVGNECWELFCLEHGIQSDGMMPSGTSNGAGHDAFNTFFSETDAGK
YVPRAVFVDLEPSVIDEVRTGVYKQLFHPEQLISGKEDAANNYARGHYTVGKDIVDLCLD
RVRKLADACSGLQGFLVFNAVGGGTGSGFGSLVLERLTADYGKKSKLGFTIYPSPQVSTA
VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDLERPTYTNLNRLISQIISSITT
SLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAAKVYHEQLSVPEITTAVFEPSS
MMAKCDPRHGKYMACCLMYRGDVVPKDVNASVANIKTKRTVQFVDWCPTGFKCGINYQAP
TAVPGAELAKVKRAVCMISNNTAVAEVFERITHKFDLMYVKRAFVHWYVGEGMEEGEFSE
AREDLATLEKDYEEVVAEAVDIEAEE
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgagagaggtgataagcatacatattgggcaagctgggatccaagtgggaaatgaatgt
tgggaacttttctgccttgaacatggcattcaatctgatggcatgatgcccagtggcacc
tctaatggtgctggccatgatgcttttaatactttcttcagcgagaccgacgccggtaaa
tatgtgcctagagctgtctttgttgatcttgaacctagtgttatcgatgaagttcggaca
ggggtctacaaacaactcttccatcctgagcagctcatatctggcaaggaagatgctgct
aataactatgcccggggacattatacagtggggaaagatattgtggatttgtgccttgat
cgagtcagaaaattagcggacgcttgctctggcttgcaagggtttttggtatttaatgct
gtgggtggtggcactggttctggatttgggtccttggttcttgaacgcctcactgcagat
tatggaaagaagtcaaaacttgggtttaccatctatccttctcctcaggtttctacagca
gttgtggagccttacaacagtgtgctgtccactcattccctccttgaacacacagatgtg
gctgtgcttttggacaatgaagccatttacgatatctgcaggcgatccttagaccttgaa
aggccaacctacactaacttgaaccgcttaatatcccaaatcatatcttcaatcaccact
tccttgagattcgatggagccattaatgtggacattacagaattccaaactaaccttgtc
ccatatcctcgaatacatttcatgttatcatcttacgcccctgtgatctcagctgcaaag
gtttaccatgagcagctctcagtccctgagatcacaactgctgtgtttgagccctcgagc
atgatggcaaagtgtgacccaaggcatggcaagtacatggcctgttgtttaatgtatcgc
ggagacgtagttccaaaggatgtcaatgcttccgttgctaacatcaagactaagaggacg
gttcaattcgttgactggtgcccaactggtttcaagtgcggtatcaattaccaggcccca
acagcggttcctggggccgaactggctaaggtgaagagagcagtatgtatgataagcaac
aacacagctgttgctgaggtttttgagagaattacccacaagtttgatctcatgtatgtg
aagcgagcgttcgtgcactggtatgtgggagaaggaatggaggaaggtgaattctctgaa
gcccgggaggatcttgccactctggagaaagactatgaggaagttgtggcagaagctgtt
gatatcgaggcagaggaatga
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