Vitis riparia (riverbank grape): 117919761
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Entry
117919761 CDS
T07274
Name
(RefSeq) uncharacterized protein LOC117919761
KO
K11799
DDB1- and CUL4-associated factor 4
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vri04121
]
117919761
Ubiquitin system [BR:
vri04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
117919761
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Beta-prop_DCAF4
WD40
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_Prp19
EIF3I
Gryzun-like
Beta-prop_RSE1_2nd
WDR90_beta-prop_4th
WD40_MABP1-WDR62_2nd
Motif
Other DBs
NCBI-GeneID:
117919761
NCBI-ProteinID:
XP_034692903
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Position
1:complement(16342656..16353135)
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AA seq
509 aa
AA seq
DB search
MQPRELPGFYYDVEKNRYFPIKAPIPGSSSSSTRLNKPPSLPKSGNNICKRIGIRAAKLL
QSRELHGDVIPSKKGKCNFEKEYLKVLASQPLVWKYQETDRIGDGALEQISTDINTSDGQ
SPKDLLLTGGVNGYLSLYEVAKVGQHFDYGVKCMPDRVWPPVIGKQTECSKAVGHIWRPT
GASLVMQSSISCIKMVGKHSPCTIDDQSATQHVLITTLGSETIGGSVYILNLTRPLDFNS
IPIIRQRMHEVASFNCTIWTADCNSKGSQAVIGTNVGVALVNMETRVPSWVCRTKSDVLS
LQLDQSGNVVLCGLRNGAVVTVDVREKQEGAYARHTRHRVPYPSHRISEASSRTVQKFSK
QWFELKGKIYPESTIFLPSSISCLLSLQLYDQYFLASSMDGSMKLYDHRLIQRGAVQSYE
GHVNSHSRIQLGVDPSERFVFSGGEDHNFRIWSITSGELLFEDKFSNSVPLTLCWEQTQR
VLDGTHQHGQMHGWSAWIGSEEGVFRMQW
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgcagccaagggaactaccgggtttctattatgacgtggagaagaacaggtactttcct
atcaaagccccaattccaggttcttcttcttcttccacccgtctcaacaaaccgccttca
ctccctaagtcgggcaacaacatatgtaagagaattggaatcagagctgctaagctgctt
caatctagggaattgcatggtgatgtgattccttccaagaaaggcaagtgtaactttgag
aaggaatacctaaaggtgcttgcctcccaacccctggtctggaagtatcaggaaacagat
agaataggtgatggtgctttggaacagatatctactgatattaacacatcagatggacag
agtccaaaagatcttttactaacaggcggtgtgaatggctacttgagtctttatgaagtt
gcaaaagttggacaacattttgattatggggtgaaatgcatgccagatcgtgtatggcct
cctgttatagggaaacaaacagagtgtagtaaagcagttggacatatttggagacccaca
ggagcctcattagttatgcagtcaagtatatcttgtatcaagatggttgggaagcactct
ccttgtacaattgatgatcaatctgccactcagcatgtgttgataactaccttgggatca
gagacaattggcggatctgtatacattctgaatctgaccagaccattagatttcaatagc
attcccatcataaggcaaagaatgcatgaggttgcttctttcaattgtacgatctggaca
gcagattgcaattctaaaggaagtcaagcagtgattggcacaaatgtgggagtggcttta
gtgaatatggaaactagggtgccatcatgggtgtgtcgtaccaaaagcgatgttttgtct
ctacaacttgatcagtcgggaaatgttgttctatgtggacttagaaatggagcagttgtg
acagttgatgttcgagagaagcaggaaggggcttatgctagacatactagacatcgagta
ccttatccttctcatagaatttctgaggcttcaagtagaactgttcaaaagttttccaag
caatggtttgagctgaaggggaaaatataccctgaaagtaccatttttttaccttcatct
atttcctgtttgctgtcccttcagttgtatgaccagtacttcttggctagctccatggat
ggatctatgaagctttatgatcatcgactaatccagagaggtgctgtacagtcatacgaa
gggcatgtgaattcccattcccgaatacaacttggagttgatccatctgagagattcgta
ttttcaggtggggaggaccacaattttcggatttggagcatcacgtctggtgaactactg
ttcgaggataaattttcaaattctgtccccttaactctgtgttgggagcaaactcaaaga
gtgctggatggaacccaccaacatgggcagatgcatggttggagtgcctggattggatca
gaagagggagtgtttcgcatgcaatggtga
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