Vitis riparia (riverbank grape): 117919837
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Entry
117919837 CDS
T07274
Name
(RefSeq) E3 ubiquitin-protein ligase RFWD3
KO
K15691
E3 ubiquitin-protein ligase RFWD3 [EC:
2.3.2.27
]
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vri04121
]
117919837
Enzymes [BR:
vri01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117919837
Ubiquitin system [BR:
vri04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117919837
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_RFWD3
zf-RING_2
zf-RING_UBOX
zf-C3HC4
Beta-prop_SPT8
zf-RING_11
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
117919837
NCBI-ProteinID:
XP_034692994
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All DBs
Position
8:19025145..19043252
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AA seq
610 aa
AA seq
DB search
MDTFTVDEETEDDEETEGEAEDYIPVEGSTRVSQNGAVTSDQAISVNGGSDAVLALRVSD
EGFQEGGGEMRRVEGGEISAMGSSSSSNGGETQEGLDGWVQDQIDGLCCPICMEAWTSGG
EHQVCCLPCGHIYGISCIKKWFQQCGRSSGKCPQCKRKCTLRNVRTLYASRVVAVDEDLR
KKIRSLEAKCASLEKKNADWCMKESDWHKREADLHLQVQQLIERTTYLECLSSEMHGRGS
GLVAARGHNFAENFGRQGSSCNFVLQKELQVDGARYFDIDASGEILVIARRLSGTGGTHV
LTKMSLISPHEMEDILLPSGTKAVKDLRVSPAKCRLALLASLGKKLSVLSMESNNVILTY
DLPTAAWSCSWDLNSSHYMYAGLQNGMLMVFDMRQTARPMAEISGPTSNPIHTIHSVLHN
SALPSGVSTLLSASSVGLCQWNFGGSEERPFLVPETKNHGVCISLAHCPSSDDIVSTFRP
KVEMSNEIAVSQYSLTPSVMGQGMQGSHVLLKRVGGNCYQKLGSSCANVNDVRLPRSAII
DLQSHHPLFVSGDEITHELVLQELPSLRVSQRLKSQKHPLRDVKYSHDLSPSLLCCLSED
TLQFFSAKFS
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atggatacattcaccgtagacgaagagacggaagatgacgaagagacagaaggcgaagcc
gaagactatattcccgtggaggggtcgactagggtttcccaaaacggtgccgttacgtcc
gaccaagcgataagcgttaatggaggcagcgatgcggtgttggcacttcgggtttccgac
gaggggttccaagaagggggaggtgagatgagaagagtggaaggaggagaaatttcggcg
atggggtcttcgtcgtcatccaatgggggtgagacccaggaggggttagacgggtgggtt
caggatcaaatcgatggtttgtgttgccctatttgcatggaagcttggaccagtggtggc
gagcatcaagtctgttgtcttccttgtgggcacatatatggcatctcttgcatcaagaaa
tggtttcaacaatgtggaagaagttcagggaagtgtcctcaatgcaaaaggaaatgcaca
ttgagaaatgttagaacactttatgcatcacgggttgttgctgtggatgaagatctacga
aagaaaattcgatctcttgaagcaaaatgtgctagtcttgagaagaagaatgctgattgg
tgtatgaaagaatctgactggcataagagagaggctgatttacatttacaagtacaacaa
cttatagagaggacaacttatttggagtgcttgtcaagtgaaatgcatggcagagggtca
ggattagttgctgcaaggggacataactttgctgagaattttggcagacagggttcctct
tgcaactttgtattacagaaagagttgcaggtagatggtgcacgatattttgatatagat
gcttctggtgaaattttggtgatcgctcgaaggctgtctgggacgggaggaacgcatgta
cttaccaagatgagcttgatatctccacatgaaatggaagatattctacttccttctggt
acaaaagctgttaaggacttgcgtgtttcccctgctaagtgtagacttgcacttttggct
tcattggggaagaaattatcagttcttagtatggaaagcaacaatgttattctcacatat
gatttgccaacggctgcttggtcatgttcatgggatctgaacagttcgcattatatgtat
gctggattacagaatggcatgcttatggtgtttgatatgcgccaaactgcaaggccaatg
gcagaaattagtgggcccacaagcaatcccattcatactatacactctgttctacacaac
tcagccctcccatcaggtgttagcacccttctatctgcttcttcagttggtttgtgccag
tggaactttggtggaagtgaagagaggccatttctggttcctgaaactaagaatcacgga
gtttgcatatcccttgctcattgtccgagcagtgatgacattgtttctacttttcgtccc
aaagttgagatgtctaatgagattgctgtttctcaatattcacttactccatctgttatg
gggcaagggatgcagggttctcatgttcttctcaagagagtgggtggcaattgctatcaa
aagttgggatcttcgtgtgcaaatgtaaatgatgttcgcctgccgagatctgcaattata
gatttacagagtcaccacccactgtttgtatctggggatgaaataacacatgaattagta
ttgcaagaattgccatctttaagagtttctcaacgcctcaagtctcagaaacatcctctc
cgtgatgttaaatactcacatgatctaagcccaagtttgctttgttgtttaagtgaggac
accttgcagtttttttctgccaaattttcatga
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