Vitis riparia (riverbank grape): 117920084
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Entry
117920084 CDS
T07274
Name
(RefSeq) importin-5-like isoform X1
KO
K20222
importin-5
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117920084
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vri03009
]
117920084
Ribosome biogenesis [BR:
vri03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
117920084
Pre-60S particles
117920084
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_EZ
Importin_rep_4
Importin_rep_6
HEAT_2
HEAT
TOR1L1_N
Vac14_Fab1_bd
HEAT_EF3_N
IFRD
MMS19_C
Cnd1
Arm
Adaptin_N
RIX1
HEAT_Maestro
IBN_N
Htt_N-HEAT_1
ARM_ARMC5
PUL
TPR_TNPO3_IPO13_3rd
DprA_WH
Motif
Other DBs
NCBI-GeneID:
117920084
NCBI-ProteinID:
XP_034693326
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All DBs
Position
8:21068519..21078842
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AA seq
1116 aa
AA seq
DB search
MASDPTPLQLNQIAAILGPDPVHFEALISHLMATANDQRSQAEALFNLCKQTHPDSLVLK
LAILLQSSPHPEARAMAAILLRKQLTRDDSYLWPNLSATTQANLKSILLDCVQRETAKTI
SKKLCDTVSELASGILPDGGWPELLPFMFQCVTSSNFKLQEAALLIFAQLSQYIGETLLP
HLDTLHSVFLQSLASSMNSDVRIAALGAAINFIQCLSNAAERDKFQDLLPLMMQTLTEAL
NSSQEATAQEALELLIELAGTEPRFLRRQLVEVVGSMLQIAEAELLEEGTRHLAVEFVIT
LAEARERAPGMIRKLPQFIQRLFAILMKMLLDIEDDPVWHSAEEEHEDAGETSNYSVGQE
CLDRLSISLGGNTIVPVASELLPAYLAAPEWQKHHAALIALAQIAEGCSKVMIKNLEQIV
SMVLNSFQDPHPRVRWAAINAIGQLSTDLGPELQVKYHQRLLPALAAAMDDFQNPRVQAH
AASAVLNFSENCTPDILTPYLDGIVSKLLVLLQNGKQMVQEGALTALASVADSSQVHFQK
YYDAVMPFLKAILVNANDKSNRMLRAKSMECISLVGMAVGKEKFRDDAKQVMDVLMSLQG
SQMEADDPTTSYMLQAWARLCKCLGQDFLPYMNVVMPPLLQSAQLKPDVTITSADSDADI
YDSDDDSIETITLGDKRIGIKTSVLEEKATACNMLCCYADELKEGFFPWIDQVAPTLVPL
LKFYFHEEVRKAAVSAMPELLRSAKLAVEKGLSQGRNESYIKQLSDYIIPALVDALHKEP
ETEICASMLDSLNECIQISGPLLDEGQVRSIVDEIKQVITASSSRKRERAERAKAEDFDA
EEGELLKEENEQEEELFDQIGDCLGTLIKTFKSSFLPFFDELSSYLMPMWGKDKTAEERR
IAICIFDDVAEQCRESALKYYDTYLPFLLEACNDENPHVRQAAVYGIGVCAEFGGSAFKP
LVGEALSRLDVVIRHSNARDSDNVMAYDNAVSALGKICQFHRDSIDAVQIVPAWLSCLPL
KGDLIEAKVVHDQLCSMVERSDRELLGPNNQYLPKIVAVFAEVLCAGKDLATEETTSRMI
NLLRQLRQTLSPSALASTWSSLQPQQQLALQSILST
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atggcttccgatcctactcctcttcagctaaaccaaatcgcggcgattctcggccctgat
ccagttcacttcgaagccctaatctcccacctcatggccaccgccaacgaccaacgctct
caagccgaggctctcttcaatctctgcaagcaaactcatcccgattctctcgttctcaaa
cttgcgatccttcttcagtcatctccgcatcctgaagcgcgagcaatggccgcgattcta
ctccgaaagcaactcactcgagatgattcttacctatggccaaatctctctgccaccact
caggcgaatctcaaatcgattcttcttgactgtgttcaacgcgagaccgccaaaacgata
tcaaaaaagttatgtgacactgtttcagaacttgcttctgggattttgcctgacggagga
tggcctgagctattaccgttcatgtttcagtgcgttacttcatcgaactttaagctgcaa
gaggcggcgctgttaattttcgcgcaattgtcgcagtacataggagaaaccctacttccg
catttggatactcttcactctgtgtttttgcagagtttggcttcatccatgaattctgat
gttcgcatcgcggctcttggggcggcgatcaacttcattcagtgcttgtccaatgcggcg
gagcgggataagtttcaggaccttttgccattgatgatgcagacattgaccgaggcgttg
aattccagccaagaagcaactgcccaagaggcactggaattgttaattgagttagctggg
acggagcccagatttctacggcgccaattggtggaagtggtgggttcaatgttgcaaatt
gcagaagcggagttgttggaggagggtacgcggcatctagccgtggaatttgttatcact
ttggctgaagcacgagagcgtgccccgggaatgataaggaagctgccacagtttatacaa
aggttatttgcgatactgatgaagatgctgctggatatcgaggatgatcccgtatggcac
agtgcagaggaggagcatgaggatgcgggtgagactagtaattatagtgttggacaggag
tgtttggataggctctccatttctcttggtgggaataccattgtgccggtggcttctgaa
ttgttgccggcttacttggcagctcctgaatggcaaaaacaccatgctgccctcattgcc
cttgctcaaattgcagagggttgctccaaggtgatgataaaaaatctagaacagatagta
tcaatggtcttgaactcatttcaagatccacatcccagggtacgatgggcagctattaat
gccattggacagttgtcaacggatttaggcccagagctacaagttaaatatcatcaacgg
ctactgcctgcactagctgcagcaatggatgattttcagaatccccgagtacaggcccat
gctgcttcagcagttctcaatttcagtgaaaattgcaccccagatatcttaaccccatac
ttagatggaattgtgagcaaactgcttgtactcctacagaatgggaagcaaatggttcag
gagggggctttgacagctttagcatcagttgctgattcatcacaggtgcatttccagaag
tactatgatgccgtaatgcctttcctgaaagctattttagtgaatgcaaatgacaaatct
aatcgtatgcttcgggctaagtcaatggagtgcattagtttggttggaatggctgttggg
aaagagaagtttagggatgatgcaaagcaggttatggatgtacttatgtcattgcaagga
tctcagatggaggcagatgatccaacaacaagctacatgttgcaagcatgggccagactt
tgcaagtgccttggccaggatttccttccttacatgaatgttgtcatgccccctttgctt
caatctgctcagcttaagcctgatgttaccattacatctgcggattcggatgctgatatt
tatgactctgatgatgatagcattgagactattacacttggggataaaaggatagggatc
aaaactagtgttttggaagaaaaggccacagcttgcaacatgctatgttgctatgctgat
gaattaaaggaagggttttttccatggatcgatcaggttgctcctacattggttcctctt
cttaaattttattttcacgaggaagttaggaaggctgctgtttcagccatgccggagctg
ttgcgatcagctaaattagctgtggagaaggggctgtctcaaggtcggaatgagtcctat
attaagcaattatctgattacataataccagccctggtggatgcgctacacaaggagcct
gagacagagatctgtgcaagcatgttggattcgttgaatgaatgcatacagatttctgga
ccacttttggatgaaggccaagtgaggtccattgtggatgagataaagcaggtgatcaca
gccagctcatctagaaagagagagagagcagaaagggccaaagcagaggacttcgatgca
gaagaaggggaactgctaaaagaagaaaatgagcaagaagaagagctctttgatcaaatt
ggtgattgcttgggcactttgatcaaaaccttcaagtcttctttcttgcctttctttgat
gagctttcatcttacctgatgcctatgtggggtaaagataaaacggctgaagagagaaga
attgccatttgtatatttgatgatgttgctgagcaatgccgagaatcagctcttaaatac
tacgatacttaccttcctttcctattggaagcctgcaatgatgagaacccacatgttcgt
caggcagctgtttatggaataggtgtttgtgcagaatttggtgggtctgcattcaaacct
cttgttggagaggctctttccaggctggatgttgtaataagacactctaatgcacgggat
tcagataatgtaatggcttatgataacgctgtttcagctcttggaaaaatatgccagttc
catcgcgatagtatagatgccgtgcagattgttcctgcttggttaagttgcttgccttta
aaaggtgatttgattgaggccaaagttgtgcatgaccaactatgttcaatggtggaaagg
tcagatagggaacttttggggcccaacaatcaatatcttcccaaaatagttgcagtcttt
gctgaggtcctatgtgctggtaaagacctggcaactgaggaaaccacaagccgaatgatt
aatctgctgaggcaacttcggcagacattgtcgccctctgccctggcatcaacgtggtca
tccttgcagcctcagcaacagctcgcgctgcagtccatcctatcaacttag
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