Vitis riparia (riverbank grape): 117920243
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Entry
117920243 CDS
T07274
Name
(RefSeq) carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1-like isoform X1
KO
K15731
carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:
3.1.3.16
]
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
vri01009
]
117920243
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vri03021
]
117920243
Enzymes [BR:
vri01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
117920243
Protein phosphatases and associated proteins [BR:
vri01009
]
HAD phosphatases
Fcp/Scp phosphatases
117920243
Transcription machinery [BR:
vri03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
117920243
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NIF
Motif
Other DBs
NCBI-GeneID:
117920243
NCBI-ProteinID:
XP_034693558
LinkDB
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Position
8:complement(7596735..7607961)
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AA seq
330 aa
AA seq
DB search
MAPTQVYVPRPLQVWRAVVNWLGFFLQIFLQIFRGTPSLPQLLSYIGLRHPLLPSSASSF
RPLPVIELPLHDSSPEPPSVPLSSPPSAPLSSALPVRVVEHSPFGGGVGGDDDGGDDRPL
EKLTVVLDLDETLVCAYETSSLPAHLRTQAIEAGLKWFELECVSSDKECEGKPNISYVTV
FERPGLQEFLEQISEFAELVLFTAALEGYARPLVDKIDAGNRFSKRLYRPSTVSTKYREH
VKDLSCLSKDLRRIVIVDNNPFSFLLQPLNGIPCVPFSAEQPNDKQLLEVLLPLLKHLSL
QKDVRPVLYERFHMPDWFQMHGIPASNLTI
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggctcccacacaagtgtacgtgcctaggcctctgcaagtgtggagagcagtggtgaat
tggctcggattcttcctccaaatcttcctccagatcttcagaggtaccccatctctgcct
cagctcctctcctacatcggccttcgccaccctcttctcccctcctccgcttcctccttc
aggcccttgcctgtgatcgagcttccgctgcacgactcctcgccagagccgccctctgtt
cctctttcttcgccgccctctgctcctctttcttcggcgctgcccgttagagtcgttgaa
catagtcctttcggtggtggcgttggcggcgatgatgacggtggtgatgatcgtcccttg
gagaagctgacggttgttcttgacttggatgagactctggtatgtgcatatgaaacctct
agcttgcctgcccatttacgcacccaggcaatagaagctggactgaagtggtttgagttg
gaatgtgtatcttcagacaaggaatgtgaaggaaaaccaaatatcagttatgtaacagtg
tttgaacgacctggtttacaagaattcttagaacagatcagtgaatttgcagaacttgtt
cttttcactgctgctcttgaaggctatgctagacctcttgttgacaaaattgatgcggga
aacagatttagtaaacggctttatcggccttcaacagttagcacaaaatatcgggaacac
gtgaaggatctatcttgtttatcaaaggatctccgtcgaattgttattgttgataacaac
ccattcagtttcttgctgcaaccattgaatgggataccgtgcgttccattttccgctgaa
cagcctaatgataagcagcttttggaggtccttctgccactcctgaagcacctctctctg
cagaaggatgtcaggcctgtactttatgagagattccatatgcccgattggtttcaaatg
catggaattcctgcttcaaatctgacaatatga
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