KEGG   Vitis riparia (riverbank grape): 117920262
Entry
117920262         CDS       T07274                                 
Name
(RefSeq) tubulin beta-5 chain
  KO
K07375  tubulin beta
Organism
vri  Vitis riparia (riverbank grape)
Pathway
vri04145  Phagosome
vri04814  Motor proteins
Brite
KEGG Orthology (KO) [BR:vri00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    117920262
  09142 Cell motility
   04814 Motor proteins
    117920262
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:vri03036]
    117920262
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:vri04812]
    117920262
   04147 Exosome [BR:vri04147]
    117920262
Chromosome and associated proteins [BR:vri03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     117920262
Cytoskeleton proteins [BR:vri04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    117920262
Exosome [BR:vri04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   117920262
  Exosomal proteins of colorectal cancer cells
   117920262
  Exosomal proteins of bladder cancer cells
   117920262
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_2 Tubulin_3 Misat_Tub_SegII
Other DBs
NCBI-GeneID: 117920262
NCBI-ProteinID: XP_034693585
LinkDB
Position
8:12091235..12095409
AA seq 447 aa
MREILHVQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGTSDLQLERVNVYYNEASCGRFV
PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL
RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM
CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPRG
LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
EYQQYQDATADEEVDYEDEEEEGLEPM
NT seq 1344 nt   +upstreamnt  +downstreamnt
atgagggaaatccttcatgttcaaggtggacaatgtggaaaccagatcggatccaagttc
tgggaagttgtttgtgatgagcacggcattgatccaactggacggtatgttgggacctct
gatctgcaattggagcgagtaaatgtctactacaatgaggcttcttgtgggagatttgtt
ccgcgtgctgttctcatggatctggaacctggcactatggacagtgttcgcactggtcct
tatggccagatcttccgtcctgacaactttgtttttggacaatccggtgctggaaataat
tgggcaaagggtcattacactgagggtgcggagctcattgattcagttctcgatgttgtg
aggaaggaagcagagaactgtgactgtctccaaggtttccaagtttgccactcacttggt
ggaggtacaggttctgggatgggcaccttgctaatctcaaaaatcagggaggaataccct
gatagaatgatgctcacgttctctgtgttcccctcaccaaaggtctctgatacggtggtt
gagccatacaatgccacactttctgttcatcagcttgttgagaatgcagatgagtgcatg
gtgcttgataatgaggctttatatgatatatgtttcagaactcttaaactgaccactcct
agctttggtgatctgaaccatttgatctctgcgactatgagtggtgtcacttgctgcctc
cggttccctggtcaactgaactctgacctccgaaagcttgctgtgaacctgatccccttt
cctcgactccatttctttatggttgggtttgctcctctgacatcacgtggatcccagcaa
taccgtgcattgacggttccagaactgacccaacaaatgtgggatgccaagaacatgatg
tgtgctgctgatccacgacatggccgctacctgacagcctcagcgatgttccgtggcaag
atgagcaccaaggaagtggatgagcaaatgattaatgtccaaaacaagaactcttcctac
tttgtggagtggattccaaacaatgtgaaatcaagtgtttgtgacattgcacccaggggt
ctgtccatggcatccaccttcattgggaattcaacatccatccaggaaatgttcaggaga
gtgagtgagcagttcactgccatgttcaggaggaaggctttcttgcattggtatactggg
gaaggaatggatgagatggagttcactgaagctgagagcaatatgaatgatcttgtgtca
gagtaccagcagtatcaggatgctactgctgatgaggaagttgattatgaggatgaggaa
gaggaaggcctggagccgatgtaa

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