KEGG   Vitis riparia (riverbank grape): 117920277
Entry
117920277         CDS       T07274                                 
Name
(RefSeq) rhomboid-like protein 20
  KO
K25216  ubiquitin-associated domain-containing protein 2
Organism
vri  Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:vri00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:vri04121]
    117920277
Ubiquitin system [BR:vri04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   LMBR1L-GP78-UBAC2 complex
    117920277
SSDB
Motif
Pfam: UBA UBA_7 Rhomboid DER1 UBA_RAD5A CUE
Other DBs
NCBI-GeneID: 117920277
NCBI-ProteinID: XP_034693600
LinkDB
Position
8:complement(12405868..12433934)
AA seq 294 aa
MNGGPSGFHNASVTRAFVIACALFTIFFGIQGRPNKLGLSYQDIFKKLQLWKLIVSVFAF
SSTPELMFGLYLLYYFRVFERQIGSNKYSVFIMFSIIVSLLFEILALSLFKEPTLNLLTS
GPYGLIFSSFVPFYFDIPISTRYRVFGIRFTDKSFIYLAGLQLLLSSWKRSILPGICGIL
AGSLYRLNFFHIRKMKFPEFISSFFSRLSSPATGSSSTAAPSRNILGNAPSYAGRQVEGN
YPSSMGAATIEPPEDAIATLVSMGFDRNSARQALVHARNDVNAATNILLEAQSH
NT seq 885 nt   +upstreamnt  +downstreamnt
atgaacggcggtccatctggtttccacaatgcatccgttacaagagcattcgtcattgct
tgtgctctattcacgatcttctttgggatccaaggtcgtcctaacaagctcggattgtca
tatcaggatattttcaaaaagcttcagctttggaagctaattgtctcagtttttgccttc
tcatctacaccagaactgatgtttggactgtatttgctatactacttcagggtttttgag
agacagataggttcgaataagtactcagtttttatcatgttctctattatagtttcatta
ctgttcgagatccttgctctatcactctttaaagaacccaccttaaacttgctcacatct
ggaccttatggtcttatattctcttcgtttgtacccttctacttcgacattccaatttca
acacggtaccgtgtatttggcatccgattcactgataaatctttcatatatttagccggt
cttcagcttcttttgtcatcctggaaaagatctatcttgccagggatatgcggcatcctt
gctggttccttatatcgcctaaatttctttcacatccgcaagatgaagtttcctgaattc
atcagctcattcttctcgcggctttcttcaccagcaacagggagctcctcaactgcagca
ccatccaggaatattctaggaaatgcaccatcctatgctggtcgccaagtggagggcaac
tatccttccagcatgggggcagccaccatagagccaccagaagacgccattgccactctg
gtttcaatgggctttgacaggaactctgccaggcaagcgctcgtccatgctagaaatgat
gtcaatgcagctactaacatccttcttgaagcacaatcccattaa

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