Vitis riparia (riverbank grape): 117920322
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Entry
117920322 CDS
T07274
Name
(RefSeq) protein TRANSPARENT TESTA 9-like isoform X1
KO
K19513
protein CLEC16A
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vri04131
]
117920322
03029 Mitochondrial biogenesis [BR:
vri03029
]
117920322
Membrane trafficking [BR:
vri04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
117920322
Mitochondrial biogenesis [BR:
vri03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
117920322
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FPL
CLEC16A_C
Motif
Other DBs
NCBI-GeneID:
117920322
NCBI-ProteinID:
XP_034693664
LinkDB
All DBs
Position
8:complement(16729441..16759103)
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AA seq
806 aa
AA seq
DB search
MWRSLWRSIDRFSLQYFKYVINELREIKVVHKANRESVVDILQSIVEIVTYGDRHDPAIF
ECFMEYQVLAEFVRLLKISRNSRIEVPLLQYLSIMIQNMDSEHAIYYCFSNDYINSIITH
QYEFDGGDLAPYYVSFLRAVSSKLNRDTLCLLVKVHEDVVVAFPLYSEALKFAYHGEKMI
QIAVRALTLNIYNVSDAMVYQFVTSPPVSEYFSDLVQSLREQCFHLDALVHAKEETSFPE
KEKELRMATDKIVDDLYYFKDILCIGESRLSKLVAQNLLNLLIFPVFFPLLQLSQSSGSD
LSAVTCLYVISRLLQVVGGKSMVNSVAGIILYPSMTSSMRDTTRGDSGNGSFQDKSFVTN
LNKLEMQCSGLESEGAENIERNCLFGHLLDYISSDSHFVSCPWDNKLGERSGLLSYIFSD
NHSLVLASLFFLLVLGGSKDLDYLLASTIGFSETKTGRQKTIDISASQLVDGSVFVKYVP
QILNALLKVLASHPPFSVQFQWHTGWFLQKLLAFQEEKLVDNDLHLFNTSYEQSCERLRK
EIDGCWFDFIPDTLRNEWESYKRALAETSLSKDPFFTLELAVHKETVGGDMASSYAWRRM
VDTVKVFIVHLHLKAFIFKGEPLEDLPINLMSSSVANSGKNHPSDISTASFGSELALGSG
IPCKIAFSKVGTRDIYLKPVGRGISGKLLLMEKNPFKTRQGVVIAIAPLAGLSPKRDESQ
PTWLHLRIREFEPRFDTRQTIGNYSIASNHVADGRWTLGFSSAEACEAARLLILEEIQKQ
RYSVESLLAPLLRSSSHGDLSDGQGE
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgtggagatctctatggcgatccattgatcgcttctctctccaatacttcaaatatgta
attaatgaattgcgggaaatcaaagttgtgcacaaggctaacagggaatcagttgtagat
atactgcaatcgatagttgagatagttacctatggtgatagacatgacccagctattttt
gaatgttttatggaatatcaagttttagcagagtttgttcgtctactgaagattagtagg
aattcaagaattgaggtgccgttgcttcaatatctaagtataatgattcaaaacatggat
tctgaacatgcaatttactattgttttagtaacgattacatcaacagcatcataacacat
caatatgagtttgatgggggagatctagctccatattacgtctcttttttaagagcagtg
agcagcaaattaaatagagacacactctgtcttctcgtaaaggttcatgaggatgttgta
gttgcattcccactatatagtgaggctcttaaatttgcttatcatggagaaaagatgatc
cagatagctgtacgtgcattaactctcaatatatataatgttagtgatgctatggtctat
caatttgtaacatctcctccagtttcagagtacttctcagacttggttcagagcttaaga
gagcaatgctttcatctcgatgcccttgtccatgccaaagaagagactagctttcctgaa
aaggagaaagaactacgtatggcaactgataaaattgtagacgatctttactacttcaag
gacatactgtgcattggcgagtctcgcttgagtaaattggtcgcccaaaatcttctcaac
ttactcatctttcctgtatttttcccattactgcagctcagccagagtagtggttcagat
ctatctgcagtcacttgtttgtatgtaatttctcgcctccttcaagttgttggtggaaaa
agcatggttaactctgtggctggtattattctatatccttccatgacctcaagcatgaga
gatactactagaggggacagtggtaatggaagttttcaagataaatcttttgtcaccaat
ttaaataaattggagatgcaatgttctggtcttgagtctgaaggagcagaaaacatcgag
aggaactgtctgtttgggcacttgttggactacatttcatcagattctcattttgtcagc
tgcccctgggataataaacttggagaaaggagtggactactatcatatattttctcagat
aatcacagtctagtgctagcatctctatttttcttacttgttctaggaggaagtaaagat
cttgattatttgttggcttcaactattggattctctgaaacaaagactgggagacagaag
actattgacatttcagcttcacagttagtggatggaagtgtctttgtgaagtatgtgcca
cagattttgaatgcattattgaaggttttagcaagccatccacctttctcagtacaattt
caatggcatacaggatggttcttgcagaagctacttgcttttcaagaagagaagttggtt
gataatgatttgcaccttttcaatacttcatatgagcagtcctgtgaacgtcttcggaaa
gaaattgatggatgctggtttgattttatcccagatactctcagaaatgaatgggaaagc
tataaaagagctcttgcagaaacatcgctatccaaagacccctttttcacgctagagctt
gccgtccacaaagaaacagttggtggtgatatggcttcttcttatgcttggcgaagaatg
gttgacacagtcaaggttttcattgttcaccttcatctgaaagcatttattttcaaagga
gaacctcttgaagatctgccaataaacttgatgagcagttctgttgctaattctgggaaa
aaccatccttcagatatttcaactgcaagttttgggtcagagctggctttaggctctgga
atcccttgtaaaattgcattttctaaagttgggacaagggacatctatctgaagccagtg
ggaaggggaatatctggaaagttgcttcttatggagaaaaatcccttcaagactcgacaa
ggggttgtgatagctattgctccattggcagggctgagtccaaagagagatgagagccag
ccaacatggttacatctccggattagggagtttgagcctagatttgatacaagacagact
attggcaactactcaattgcatccaatcatgtggctgacgggagatggacactcggtttt
tctagtgctgaagcttgtgaggctgctcgattgctgatcctcgaggaaattcagaagcag
agatactctgtagagagcttacttgctccactacttcgcagtagttctcatggagattta
tcagatggtcaaggtgagtaa
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