Vitis riparia (riverbank grape): 117920395
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Entry
117920395 CDS
T07274
Name
(RefSeq) LOW QUALITY PROTEIN: serine/threonine-protein kinase ATG1c-like
KO
K08269
serine/threonine-protein kinase ULK2 [EC:
2.7.11.1
]
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
117920395
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
vri01001
]
117920395
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vri04131
]
117920395
03029 Mitochondrial biogenesis [BR:
vri03029
]
117920395
Enzymes [BR:
vri01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
117920395
Protein kinases [BR:
vri01001
]
Serine/threonine kinases: Other
ULK family [OT]
117920395
Membrane trafficking [BR:
vri04131
]
Autophagy
Autophagosome formation proteins
Atg1 complex
117920395
Mitochondrial biogenesis [BR:
vri03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
117920395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
MIT_ATG1
PK_Tyr_Ser-Thr
YrbL-PhoP_reg
ATG1-like_MIT2
Kdo
APH
Pkinase_fungal
Motif
Other DBs
NCBI-GeneID:
117920395
NCBI-ProteinID:
XP_034693777
LinkDB
All DBs
Position
8:15406727..15418507
Genome browser
AA seq
732 aa
AA seq
DB search
MAQTPSRGRVVGDYLVGRQIGSGSFSVVWHARHRVHGTEVAIKEIVTGRLNKKLQESLMS
EIFILKKINHPNIIRLHDIIEVPGKIHLVLEYCRGGDLSMYIQSYVRVPEATAKHFMQQL
AAGLQVLRDNNLIHRDLKPQNLLLSTNDNNAVLKIADFGFARSLQPRGLAETLCGSPLYM
APEIMQLQKYDAKADLWSVGAILFQLVTGRTPFTGNNQIQLLQNIIKSSELHFPPDNNDL
SADCKDLCQKLLRRNPVERLTFEEFFNHPFLSRKQPDEALSSRGSSRIIDGFPLSECNPV
RNTEESSQEDCMPFPLDDDSSGPEGSPSFLRRRSSMKSTYGFSLDKKVDRRETIFNTPNN
MDLASKYSSASHKPEITGFRIDSLRPSDENVKEPLKSMGQRPMRSCSRVVDSLEELVDQD
YVFVSGXPMDVSSSSAIASKPSHSQCKSGSAPLTSVNMKTKSSAPMPIAGAGITNTFYTG
SLESHSSAPSGTSQGSMDIGDALEQPSTHCMTRIKSLQQCASVITELVNEKIEAGKQLEA
FSIQLVILAIWKQALHICHTQAASAMEGSPTQETSRLRRSTDKKHGSPDMRECLDIVNNQ
GPGDICSQIEREFLHQVGHAEELAKVIEPGSTEMPDAMEMIFQSALALGRNGAVDELMSD
VESAVSLYSKAVHLLVFLLVEAPSLILNPPFSLTNSDRYRLRTYIDILNIRQVHSRSQRM
NLLKCEDQQCPP
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atggctcagaccccgagcagagggcgagtggttggggactatctggtgggtcggcagata
gggtcaggatcgttctcggtggtgtggcacgcaaggcaccgagttcacggaaccgaggtg
gcgattaaggagatcgtgacgggtcggttgaacaagaaattgcaggaaagtctgatgtcg
gagatctttattttgaagaagatcaatcatccaaatattattcgtttacatgatataatt
gaggttcctggaaagatacaccttgttttggaatactgccgagggggtgatctttccatg
tatattcaaagctatgtaagagttccagaagcaactgcaaagcacttcatgcagcagcta
gcggctggtttacaagttcttcgtgataataatcttatacatcgagatctaaagccacag
aatcttcttctctccacaaatgacaacaatgcagtcctgaagattgctgattttggattt
gcaagatctctacaacctagaggtcttgcagaaacattgtgtggttctccactgtacatg
gcgccagagataatgcaacttcagaaatatgacgcaaaggcagatctctggagtgttggt
gccattctctttcaacttgtgactggaagaacaccatttacaggaaacaatcagatacag
ttgctccaaaacattattaaatctagtgaattgcatttccctcctgataataatgatttg
agtgctgactgcaaagatttgtgtcagaaattgctgcgccgcaatccagtggaacgacta
acatttgaagagttttttaaccacccattcctttctcgaaagcaaccagatgaagcgtta
agtagtaggggatcatcaagaataattgatgggtttcctttgtctgaatgcaatcctgtg
agaaacacagaggaaagttctcaagaggattgtatgcctttccctctagatgatgattct
agtggtcctgaagggagcccatcatttttgaggaggaggtcctcaatgaagtctacctac
ggattttctcttgataaaaaagttgatagaagggaaacaatatttaacactcccaacaac
atggatcttgcttctaaatacagcagtgcatcacataaaccagaaattactggctttagg
attgacagtcttaggccttcagatgagaatgtcaaagaacctctaaaatccatgggacaa
agaccaatgagaagttgttcaagagttgtggattcattggaggagttggttgatcaggat
tatgtttttgtatctgganccccaatggatgtgtcatcttcctcagctattgcttccaag
ccaagtcattcacaatgcaaatcagggagtgcccctctaacatctgtaaatatgaaaacc
aaatcaagtgcaccaatgccaattgctggtgcaggaatcactaacacattttatactgga
agcttggaaagtcatagctcggcaccttctgggacttcacaaggatccatggatatagga
gatgctttagagcagccatcaactcactgcatgacaaggattaagtcattgcagcaatgt
gcatctgtcatcactgaattggtaaatgagaagattgaggctggtaagcaactagaagca
ttctcaatccagcttgtaattcttgcaatttggaagcaagcactgcatatttgccataca
caggctgcctcagctatggagggaagtccaacccaagaaacttctagattaaggaggagc
actgacaagaagcatgggagtcctgatatgcgagaatgtcttgatattgttaacaatcaa
gggccaggggatatttgctcccagattgagagggaatttctccatcaagttgggcatgcc
gaggaacttgctaaggttattgagcctggaagtacagagatgccagatgcaatggagatg
atatttcaatctgcccttgccttgggtagaaatggggctgttgatgagctcatgagtgat
gtggaaagcgcagtgtccttgtattcaaaggcggtgcacttgttagtgttccttctagtg
gaagcaccgtccctcattctcaaccctcccttctctcttacaaactcagaccggtatagg
cttcgaacttacattgatatccttaatatcaggcaagtccactcaaggtctcaaaggatg
aatcttcttaagtgcgaggatcaacaatgccccccttaa
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