KEGG   Vitis riparia (riverbank grape): 117920411
Entry
117920411         CDS       T07274                                 
Name
(RefSeq) splicing factor U2af small subunit B-like
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
vri  Vitis riparia (riverbank grape)
Pathway
vri03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:vri00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    117920411
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:vri03041]
    117920411
Spliceosome [BR:vri03041]
 Complex A
  U2 snRNP components
   U2 related factors
    117920411
 Complex B
    117920411
SSDB
Motif
Pfam: zf-CCCH RRM_1 zf_CCCH_4 zf-CCCH_4 Torus
Other DBs
NCBI-GeneID: 117920411
NCBI-ProteinID: XP_034693802
LinkDB
Position
8:complement(18195906..18200717)
AA seq 340 aa
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMVTP
GVDPQGQPLDPRKIQEHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE
HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENICNRGGYCNFMHLKKISREL
RRQLFGRNRRRRSRSRSHSPYRHRGHEEHPHGPHGPHGPHGPRGPRGSNRRDDDRDHRYH
DRGGRRPRSRSPARRGGRSRSPGGRRNKSPVREGSAERRAKIEQWNREREQAEATNKNDN
SHSDNGNNNNDFEQDDQQYYNPQHQEEDQQQQQQHGGYNY
NT seq 1023 nt   +upstreamnt  +downstreamnt
atggcagagcacttggcatctatattcgggacagagaaggatcgcgtcaactgtccgttc
tacttcaagatcggagcttgcaggcatggagatcgatgctccaggcttcacaccaagccc
agcatcagccccaccctcctcctttccaacatgtaccaaaggcctgatatggtcacccct
ggcgtcgatcctcagggccaacctctcgatcctcgcaaaatccaagagcacttcgaggat
ttttatgaagatttatttgaggagctgagtaagtatggagagatcgaaagcttgaacatc
tgtgacaatttggctgaccatatggtgggtaatgtatatgttcagtttagagaggaagaa
catgctgcaaatgcacttcgaaatttgaatggaaggttttatgcagggcgtcccatcatt
gttgacttctccccagttacggatttccgtgaagctacatgtaggcaatatgaggaaaat
atatgcaatcgcggcggctactgcaactttatgcatctgaaaaagattagtagggagttg
aggaggcaattgtttgggagaaacaggcgtaggcgcagtcgaagcagaagccacagtcca
tacagacaccgtggtcatgaggagcatccacatggtcctcatggtccacatggtccacat
ggtccacgtggtccacgtggctctaatagaagagatgatgacagagatcatcgttaccat
gatagggggggtaggaggcctagaagcagaagtcctgcacgtagaggaggacgaagcaga
agccctggtggaagaaggaataagagtccagtcagggaaggcagtgctgagagaagggct
aagattgagcaatggaatagggaaagagaacaggcagaagctactaataagaatgataat
agccacagtgacaatggtaacaacaacaatgactttgaacaagatgatcaacagtattat
aatccacagcatcaggaggaggaccagcagcagcagcagcagcatggaggatacaactat
tga

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