Vitis riparia (riverbank grape): 117920464
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Entry
117920464 CDS
T07274
Name
(RefSeq) chromatin-remodeling ATPase INO80 isoform X1
KO
K11665
chromatin-remodeling ATPase INO80 [EC:5.6.2.-]
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
117920464
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vri03036
]
117920464
Chromosome and associated proteins [BR:
vri03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
117920464
INO80 complex (yeast)
117920464
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
DBINO
Helicase_C
ResIII
DEAD
HDA2-3
Motif
Other DBs
NCBI-GeneID:
117920464
NCBI-ProteinID:
XP_034693903
LinkDB
All DBs
Position
8:complement(22549952..22567546)
Genome browser
AA seq
1558 aa
AA seq
DB search
MEPKPHPNNGFSFSNLFNLESLMNFQLPQQDDDFDYYGNSSQDESRGSQGGTMGDYHNGI
MSERELSLVSKKRRSQNSEDEEEDGNYSTFISEERYRSMLGEHIQKYKRRFKDPSPSPAP
ARMGVSVPKSTLGSKTRKLGNEHRGGLHEVETPSEWLADVGPQKMVGFHDADFAPEYGTS
RTIYESSYLDIGEGIAYRIPPAYEKLAVTLNLPTFSDIRVEEYYLKSTLDLGSLAEMMTA
DKRFGPKSRAGMGEPQSQYESLQARLRALSSSNSVQKFSLKVSDIALNSSSIPEGAAGSI
QRSILSEGGALQVYYVKVLEKGDTYEIIERSLPKKQKVKKDPSMIEKEEMERIGKVWVNI
VRRDIPKHQRIFINFHRKQLIDAKRFSENCQREVKLKVSRSLKLMRGAAIRTRKLARDML
VFWKRVDKEMAELRKKEEREAAEALRREQELREVKRQQQRLNFLITQTELFSHFMQNKAT
SQPSEALPVDDETPKDQELLVSSSDDVPGEEQDPEDDELKKEALKAAQDAVSKQKRLTSA
FDNECLKLRQAAEPEVPSLDASGAAGSSNIDLLHPSTMPVASSVQTPELFKGSLKEYQLK
GLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAPASVLNNWAD
EISRFCPDLKTLPYWGGLQERMILRKNINPKRLYRREAGFHILITSYQLLVSDEKYFRRV
KWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNNMAELWALLHFIMPTLFD
SHEQFNEWFSKGIENHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDVVSELTGKTEVTVH
CKLSSRQQAFYQAIKNKISLAELFDGNRGHLNEKKILNLMNIVIQLRKVCNHPELFERNE
GSTYLYFGEIPNSLLPPPFGELEDMHYAGAQNPITYKVPKLVHQEVMQSSGIISSTARRG
VHRETFLKHFNIFSPVNIYQSVLPQENNSNGSAVKSGTFGFTHLMDLSPEEVAFLATGTF
MERLLFFIMRWDRQFLDGILDLLMEAEEEDFSNSHLDSGKVRAVTRMLLMPSRSETNLLR
RKLATGLGHAPFEALVVPHQDRLQANTRLVHATYTFIPRTRAPPINAHCSNRNFAYKLLE
ELHHPWLKRLFIGFARTSDYNGPKKPDVPHHLIQEIDSELPVSKPALQLTYKIFGSSPPM
QSFDPAKLLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLD
GSSTIMDRRDMVRDFQLRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMD
RAHRLGQTKDVTVYRLICKETVEEKILQRASQKNTVQQLVMTGGHVQGDLLAPEDVVSLL
LDDAQLEQKLRDLPLQKDKQKKKRGTKGILLDAEGDATLEDFPNISQGNGQEPSPDAERP
KSSSKKRKAATDKQTPPKPRNSQKAMKNVDSYTGMTDPNSMAMDYELDDSLQNDDMQLQK
PKRPKRPTKSVNENLEPAFTNSTVIIEQTQYQPHLELGPGGLRAGGKDDTPLHTDSLT
NT seq
4677 nt
NT seq
+upstream
nt +downstream
nt
atggaacccaagccccaccccaacaacggcttctccttctcgaatctgttcaatcttgag
tctttgatgaactttcaactcccacaacaagatgatgattttgattattatgggaatagt
agtcaggatgagagcagaggtagccaaggtggaacaatgggagactatcacaatggaatt
atgtctgagcgagaattgagcttggtgagtaagaagagacggtctcaaaacagtgaggac
gaggaagaggacggtaattacagcaccttcatttcagaggagcggtatcggtcaatgctt
ggagaacacattcagaaatataagaggaggtttaaagatccctcaccaagccctgctccg
gcacggatgggggtttcagttccaaaaagtactttaggctccaaaacaaggaagttgggg
aatgagcacagaggagggttgcatgaagttgaaaccccatctgagtggcttgctgacgtt
ggtcctcaaaagatggttggctttcatgatgcggattttgcaccagaatatggcacttct
agaacgatctatgaatcatcttatttggatattggggagggcatcgcttataggatccca
ccagcttatgaaaaattggctgttacactaaacttgccaaccttctcagatatacgggtg
gaggaatattacttaaagagcaccctagatttaggttccttagcagaaatgatgaccgct
gataagagatttgggcctaaaagccgagcagggatgggtgagcctcagtcccagtatgaa
tcacttcaggcgagattgagggccttgtcatcttctaattcagtccagaagttcagtctg
aaagtatctgatattgcactaaattcatcctccatcccagaaggggctgctggaagtata
cagcggtctattttgtcagagggtggtgcattgcaggtgtactatgtgaaggtcttggag
aaaggagacacttatgagatcattgaacgaagtttaccaaagaagcaaaaggtaaagaag
gacccatctatgatcgagaaagaggaaatggagaggattggaaaagtttgggtaaacatt
gtaagaagagacataccgaagcatcagagaatatttattaatttccatcgaaagcaacta
attgatgccaaaaggttctcagaaaactgtcaacgagaggtgaaactgaaggtgagcaga
tcacttaaattgatgaggggtgctgcaatccgcacgaggaaacttgctagagatatgctt
gtattttggaaaagagtggataaagagatggcagaattgaggaagaaagaggaaagagaa
gctgcagaagctttgaggcgtgaacaggaacttcgagaagtgaagagacaacagcaaagg
ctcaattttctgataacacaaacggagctgttcagtcacttcatgcagaacaaggcaact
tcacagccctctgaagctttacctgtcgatgatgaaacaccgaaggaccaggaactgctt
gtaagctcttcagatgatgtgccaggagaagaacaagatcctgaggatgatgaattgaaa
aaggaagctctgaaagctgctcaagatgcagtttctaagcagaaaaggttaactagtgca
tttgataatgaatgtttgaagctgcgccaagctgctgaacctgaggtcccttcactggat
gcatctggtgctgcaggttctagtaacatagatctactgcacccctccaccatgccagtg
gcatcatctgtgcagacgccagagttgtttaaaggttctcttaaagaatatcagctaaaa
ggccttcagtggctggttaattgttatgagcagggtctaaacggtattcttgccgatgag
atgggcctgggaaagactatccaggcaatggcattcttggctcatttggcagaggaaaag
aatatatgggggccttttctggttgttgcacctgcttctgtcttgaacaactgggctgat
gaaattagccgcttctgccccgacttgaaaactcttccatattggggagggcttcaagaa
cgaatgatacttaggaaaaacatcaatccaaagcgtttatatagaagggaggcaggattt
cacattctcatcaccagttaccaactgttggtgtctgatgagaagtatttccgacgtgtg
aaatggcagtatatggtattggatgaagctcaggcaatcaaaagctcaaacagtataagg
tggaagacactgctcagttttaattgtcgaaatcggttactcctcactggtacgcctatc
cagaataacatggctgaattgtgggcccttctacatttcattatgcctaccttatttgac
agccatgaacaattcaatgaatggttttcaaagggaattgagaatcatgctgagcacggg
gggacgttaaatgagcaccagctcaacagattgcatgcaattttgaagcccttcatgctg
cggcgggttaagaaagatgtggtttctgagcttacaggcaaaacagaggttacagtgcat
tgcaagttgagttctcggcaacaagctttctatcaagctataaagaataagatatctctt
gctgagttgtttgatggtaatcgtgggcaccttaatgagaagaaaattctcaatttaatg
aatattgttattcagttgagaaaggtttgcaaccatccagagttgtttgaaaggaatgag
ggaagcacatacctttattttggagagattccaaattctcttcttcccccaccctttggg
gagttggaggacatgcactacgcaggagctcagaatcctattacatacaaggtgccaaaa
ctcgtccaccaagaagtaatgcaaagttccgggatcatttcctcaacagctcggcgcggt
gttcatagagaaacatttctgaagcattttaatatattttccccagtaaatatttatcag
tctgtgctcccacaagagaataactccaatggttcagctgttaaaagtggaacatttggt
tttacccatctgatggatttgtccccagaagaggttgcatttcttgcaactggtactttc
atggagagacttctctttttcattatgagatgggaccggcaatttttggatggaatcttg
gacttgctcatggaagccgaggaggaggattttagtaacagtcatcttgatagtgggaaa
gtaagagctgttacacgaatgctactgatgccatcgagatctgagactaatttacttaga
agaaagcttgcaactggtctgggtcatgctccttttgaggctctagttgtccctcatcag
gataggcttcaagcaaacactaggcttgttcatgctacatacactttcatcccacggacc
agagctcccccaatcaatgcccattgctcgaatagaaactttgcttataaattgcttgaa
gaactgcatcacccctggcttaagaggttgtttattgggtttgcacgcacatctgactat
aatggacccaaaaagccagatgttcctcatcatttgattcaagagattgactctgaattg
cctgtttcaaaacctgctcttcagttgacttacaagatatttggttcatctcctcccatg
caaagctttgacccagcaaaattgctcacagactctgggaagcttcaaacacttgacatt
ttactaaaacgcttgagggctgaaaatcaccgagtactcttgttcgctcaaatgacaaaa
atgctaaatatactggaggactacatgaactataggaaatatagatatctcagacttgat
ggttcttccacaattatggaccggcgtgacatggtcagagatttccagcttcggagtgat
atctttgtgttcttgctgagtaccagagctggtggactgggtattaatttgactgcagct
gacactgtcattttctatgaaagtgattggaacccaaccttggatttacaggcaatggat
agggctcatcgcttgggtcagaccaaggatgttactgtctaccggttaatttgtaaagag
acagttgaggagaagattttgcaaagagcaagtcagaaaaatacagtgcagcagcttgtg
atgacaggtggtcatgttcagggtgatctcttggctcctgaggatgttgtttctttactt
cttgatgacgcccagttggagcagaaactaagagatctgccacttcagaaggataaacaa
aagaaaaagcgtgggaccaaaggtatattgctggatgcagaaggggatgcaactttggaa
gatttcccaaacatatctcagggtaatggacaggagccctctccagatgcagagagacca
aaatccagtagtaaaaagaggaaggctgccactgacaagcaaactcctccaaagccaagg
aattctcaaaaagcaatgaaaaatgttgattcttatacggggatgactgatcccaactcg
atggcaatggactatgagttggatgattcccttcaaaatgatgacatgcagctacagaag
cctaagagaccgaaaagaccaacaaagagtgtgaatgaaaatcttgaaccagcatttacc
aactccacagtgattatagagcaaacacaataccaacctcaccttgagcttggtcctggt
ggcctcagagcgggaggaaaggatgatacgcccctgcatactgactctttaacgtga
DBGET
integrated database retrieval system
