Vitis riparia (riverbank grape): 117920488
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Entry
117920488 CDS
T07274
Name
(RefSeq) uncharacterized protein LOC117920488 isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vri04131
]
117920488
Membrane trafficking [BR:
vri04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
117920488
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
117920488
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_CDC20-Fz
ANAPC4_WD40
WD40_Prp19
Beta-prop_RIG_2nd
WDR55
WD40
PEP5_VPS11_N
Beta-prop_HPS5
Synaptobrevin
TFIIIC_delta
Beta-prop_IFT140_1st
ELYS-bb
Motif
Other DBs
NCBI-GeneID:
117920488
NCBI-ProteinID:
XP_034693949
LinkDB
All DBs
Position
8:complement(7813261..7829717)
Genome browser
AA seq
1127 aa
AA seq
DB search
MFAKRLIQKATQHHLHHHQHHQHQDHHQPNEQHSSVALTDLDLRIAIHYGIPSTASILAF
DPIQRLLAIGTLDGRIKVIGGDNIEGLFISPKQLPYKYLEFLQNQGFLVSISNDDEIQVW
NLERQCISCCLHWESNITAFSVISGSNFMYIGDEYGSISVLKCEADDGKLLQLPYNIFAK
SISEAAGFSFFNHQPVIGVLPQPCSSGNRVLIAYENGLIILWDVSEAQIIVAKGDKNLQL
NNRAVDSPSEADSNLPDDASEQHLEEKEISALCWASSDGSILAVGYIDGDILFWNLSSAA
STKGQQTGSLGNNVVKLQLSSAERRLPIIVLHWSTSNKPHNDCDGLLFIYGGDAIGSEEV
LTILSLEWSSGVETLRCAGRVELTLVGSFADMILLPTAGATGINQNASLFVLTNPGQLHF
YDDASLSALISQQERKSSLSAVEFPAAVPTSDPHMTVAKLSFLHTGGNSSKALSEIASVM
KHVSTPTLTGRAKWPLTGGVPSQLSFAEGKRVERVYVAGYQDGSVRIWDATYPVLSLICV
LEGEVQGIKVAGSSASVSKLDFCHLTLSLAVGNACGLVRVYDLNDNSDKTSFHFVTESNQ
EVHVLPQQKGPQCRAAFCLLNSPIQALKYTNKGGKLAVGFECGHVAVLDMNSLSVLLSMD
CISGSSSPVISIIWKAITNNHTLVKSPKHSESEISNDPPKELMFILTKDSKVVVIDGSTG
NMINSGPMHLKKESTAISMYVIEDNVPVSGSSNEKQLQSSNEAPTKNEPVQDTVPVGINS
PGSSSETMYSGARLLDSHVLLCCENALRLYPTKSVIQGDNKPICKVELAKPCCWTTIFKK
DEKVYGLMLLYQTGAIEIRSLPDLEVVSESSLMSILRWAFKANMDKTISSSHDGQIALAN
GCELAFISLLAGENGFRIPESFPCLHDKVLAAAADAAIGLSSNQKKKQGTAPGVLSGIVK
GFKGGKVIHNVDLSASAKSNFAHLEDIFLRSPFPDPSPTATDNQEVVELNIDEIEIDDEP
LPVASTSSRKVKNHKKEKGTERERLFQGTTADIEPRMRTREEIIAKYRKTGDASSVAAHA
RDKLVERQEKLERISKRTEELQSGAEDFASLANELVKAMEGRKWYQI
NT seq
3384 nt
NT seq
+upstream
nt +downstream
nt
atgttcgccaagcgccttatacagaaggctacgcagcatcatcttcatcatcatcaacat
catcaacatcaagatcatcatcagccgaatgaacaacatagcagtgtggcattaacagac
ttagatctgcgaattgctattcactatggtatcccatcaactgcatcaatcctggctttt
gaccccattcagcgcctcttagccattgggacacttgatggtagaataaaagtgattggt
ggtgataatattgaaggacttttcatatccccaaagcaattaccttacaaatacctagag
tttctacaaaaccagggttttttagtcagcatctcaaatgatgatgagattcaggtctgg
aatctggagagacaatgtatttcttgttgtttacattgggaatccaatattactgctttc
tcagtaatcagtggctccaacttcatgtacattggagatgagtatggttcaatttccgta
ttgaagtgtgaagctgatgatggaaagcttctgcagttgccatataatatttttgcaaag
tccataagtgaagcagctgggttttcgttttttaatcaccaacccgtcattggagttctt
ccccagccttgttcttctgggaacagagtattgattgcatatgagaatgggttgatcatt
ctttgggatgtttctgaagctcagattattgttgctaagggtgataagaatcttcagttg
aacaatagagctgttgattctccaagtgaagcggatagtaatctgccagacgatgcatct
gaacaacatctagaagagaaagagatcagtgctctttgttgggcttcttctgatgggtct
attcttgctgtgggatatatagatggagatattttgttttggaacctatcaagtgcagcc
tctactaaaggccaacaaactggatctttaggcaataatgttgttaagctccaactatca
tctgctgaaaggagactccctatcattgtcttgcactggtccacaagtaataaaccccat
aatgattgtgatggccttctttttatttatggtggtgatgcaataggatctgaagaagtt
ctgacgattttgagtcttgaatggtcatctggagtggagactttaagatgtgctggacgt
gtggagcttacacttgttggctcatttgcagacatgattttgttaccaactgctggggct
acagggattaatcagaatgcttctctatttgtattgacaaaccctggacaactgcatttt
tatgatgatgctagcttgtctgccttaatatctcagcaagaaaggaaatcatctctctct
gctgtggaatttcctgctgctgtacctacatctgatccacatatgactgtggcaaagctc
agttttctacacacaggtggaaactcatcaaaggctttgtcagagatagcatcagttatg
aaacatgtctcaacaccaaccctgactggacgtgcaaagtggccattgactggtggtgtg
cctagtcaattatcttttgctgagggcaaaagggtggagagagtgtatgtagcaggttat
caagatgggtctgttcggatatgggatgccacataccccgtcctgtcactaatttgtgtt
ttagaaggcgaggtacagggtataaaagtggctggttcaagtgcctcagtgtcaaaattg
gacttttgccacttaacattaagcttggctgttggcaatgcttgtggtctggttcgtgtt
tatgacctaaatgacaattcagataagacaagcttccactttgttacagaaagtaatcaa
gaagttcatgtcttgcctcaacagaaagggcctcagtgtagagctgccttttgtcttctc
aattccccaattcaggcactaaaatatacaaacaagggaggcaagcttgcagtaggattt
gaatgtggtcatgttgcagtgcttgatatgaattcactatcagtcctgttatcaatggac
tgcatatctggctctagctctccagtcatttcaattatttggaaagccattacaaacaat
catacccttgtgaaaagccctaagcactctgaatcagaaatttctaatgatcctccaaaa
gaattaatgttcatcttgaccaaggattcaaaggttgttgttattgatggtagtactggt
aacatgatcaactctgggccaatgcacttgaaaaaagaatcaactgcgatttccatgtat
gttatagaggacaatgttccagtatctggatcatcaaatgaaaagcagctacaatcatcc
aatgaggctcctaccaagaatgagcctgtgcaagacactgttccagttggaattaactcc
cctggctcctcttcagaaactatgtattctggggcaagattattggattcacatgttttg
ctatgttgtgaaaatgcactgcgattataccctacaaaatctgtgattcaaggggacaat
aaacccatttgtaaagtggaacttgcaaaaccttgttgttggactacaatcttcaagaaa
gatgagaaagtttatggactgatgttactttatcagactggagcaattgaaatcagatct
ttgccagatctagaagtggtcagtgaaagctccttgatgtcaattttgaggtgggccttc
aaggcaaacatggacaagacaatcagttcttctcatgatgggcagattgcactggcaaat
gggtgtgagttggcttttatctctctattagcaggtgaaaatggtttcaggattccggaa
tcttttccttgtctccatgataaagttcttgcagctgctgcagatgctgccatcggtctc
tcttcaaaccagaagaaaaagcagggaactgctcctggggttctgagtggtattgttaaa
ggctttaaaggaggaaaggtgatccataatgtggatctttctgcatctgctaagtctaat
tttgcacacttagaggacatatttttgaggagtccattcccagacccatctccaactgct
acggataatcaggaagttgtggagcttaacatagatgaaattgaaatagatgatgaacct
ttacctgtggcatctacctcttcccgaaaagtgaaaaatcataagaaagagaagggaact
gaaagagagagattatttcaaggcacaactgctgatattgagcccagaatgagaacacgt
gaagaaattatagctaaatacagaaaaacaggagatgcctcttcagtggctgcacatgca
agagacaagcttgtggagcggcaggaaaaactagagagaattagtaagcgcaccgaagag
ctacaaagtggagcagaagactttgcatcattggcaaacgagcttgtcaaggcaatggaa
gggcgaaaatggtatcagatatga
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