Vitis riparia (riverbank grape): 117920721
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Entry
117920721 CDS
T07274
Name
(RefSeq) uncharacterized protein LOC117920721 isoform X1
KO
K03538
ribonuclease P protein subunit POP4 [EC:
3.1.26.5
]
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
117920721
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vri03009
]
117920721
03016 Transfer RNA biogenesis [BR:
vri03016
]
117920721
03029 Mitochondrial biogenesis [BR:
vri03029
]
117920721
Enzymes [BR:
vri01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
117920721
Ribosome biogenesis [BR:
vri03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
117920721
Transfer RNA biogenesis [BR:
vri03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
117920721
Mitochondrial biogenesis [BR:
vri03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
117920721
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_P-MRP_p29
NCKAP5
Motif
Other DBs
NCBI-GeneID:
117920721
NCBI-ProteinID:
XP_034694203
LinkDB
All DBs
Position
8:13534088..13545239
Genome browser
AA seq
306 aa
AA seq
DB search
MATGTILEDQKKRTLEALERRFAVAKAELLQQQEHLSKKRFRGVDEKVSPCTNSFSVGSS
THPTDSSVTPTLNASLEKGHATSQDVEANGPAYSQLSQTVHENLLATNAKTTSKRGSTAD
KILHELLKNGDSAHKYMMGSRSMKFDNWILLDNVVQGRGASGARIRDLLSHSKNSRKHIS
MKQNKRCGSLNLPQELHRYDIFKPMHDMWKGYMMQLLKNNGKNQLVQPLLSADLHGAIIL
VVECKIAAFNGVSGMMIRETAETLGIITQDDKFRVVPKKGSVFIFQADCWKVTLQGDKLT
SRNLAL
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccggaacaattcttgaagatcaaaagaaacgcactttggaagcgttggagcga
aggtttgccgttgccaaggctgagcttctacaacagcaggaacatctaagcaagaaacga
tttcgcggagtagatgaaaaagttagtccctgcacaaattctttctccgttggttcttca
actcatccgactgactcatcggtcacgcccacattgaacgcctcattggagaaaggtcat
gcaacttcacaagatgtggaagcaaatggtccagcgtattctcagctctctcaaaccgtt
catgagaatttgttggctacaaatgcaaaaaccactagtaaaagaggaagcacagcggat
aaaattttgcatgagcttctcaaaaatggtgattcagctcataaatacatgatgggatcc
agaagtatgaaatttgacaattggatccttcttgataatgttgtacaaggacgtggtgct
tcaggtgctcgtatcagggatttgctgagccactcgaagaactccagaaaacacatatcc
atgaagcaaaataaaagatgtggatcattgaatttgcctcaagagctccataggtatgat
attttcaagccgatgcatgacatgtggaaaggctacatgatgcaacttcttaaaaataat
gggaaaaatcagttggttcagcctcttctcagtgcagacctacatggtgctattattcta
gttgttgagtgtaagatagctgccttcaatggagtgagtggtatgatgattcgtgaaact
gcagaaacacttggtataattacacaagatgataaattccgagttgtgcccaaaaagggg
tctgtgttcattttccaagcagattgctggaaagtcaccttgcagggagacaaactcact
tcaagaaatttagccctgtga
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