Vitis riparia (riverbank grape): 117920774
Help
Entry
117920774 CDS
T07274
Name
(RefSeq) LOW QUALITY PROTEIN: CDK5RAP3-like protein
KO
K28116
CDK5 regulatory subunit-associated protein 3
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vri04131
]
117920774
Membrane trafficking [BR:
vri04131
]
Autophagy
ER-phagy
ER-phagy recepters
117920774
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CDK5RAP3
WSD
DUF5411
Noelin-1
REST_helical
Motif
Other DBs
NCBI-GeneID:
117920774
NCBI-ProteinID:
XP_034694291
LinkDB
All DBs
Position
8:20260290..20264225
Genome browser
AA seq
570 aa
AA seq
DB search
MQNPDDIRNLPIDITFSRLGEWLVDRKRVPADWRKRLTSIRARISTAFASLPKEIDPYFQ
TLDPEGIGYIEAKQIYDILLRSTPESRNIFGRLSGAAGVWEAIVRAFEKDHIFLGEAAQI
MVQNVNYEIPYQKKQVQKIQQQLAELERKEADIKRNAALSAAKYAEACQELGLQGNNVRL
ELLETTKTLPSIFSKFLEVISSDCVLQAMEYYSNFVRDAHTEKDKMSRTVLINLGDVREN
PPCLNVSAGSDVLDSMNVQPSSHETNNMTEVMDVPADYIDWDISVDSSQIDWDIGTVEET
DDTGNGLGPYEIVNASEILQNISPTGAVESDQTLLKKEEDGLVPGMSASDISWDICVENP
QVDEVEDVIFPNEDMKTQASVLDTRTQTPEIKEDRSQLLETEYRNKILDDLFEMKAFLNQ
RLVELRNEETLSLQHQVQAVAPFVLQQYTPDAIQAMLSDVSSAISLLTNRKMQDLIMILN
SKRFLDRLVSTLEEKKHHEAKLKEGLKDLAIRRMELQNSLSSSWPKQEAALAKTRELKKL
CESSLSSMFDGRPVNIIGEINTLLNSSITV
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgcagaatccggacgatattcgcaatcttcctatcgatatcacgttttctcgtctcgga
gaatggttggttgaccggaaaagagttcccgctgattggcggaaacgtctcacttcaatc
agggctcggatttcaacggcgttcgcttcgctgcctaaggagatcgatccctatttccaa
accctagatcctgaaggaattggttatatagaagccaaacaaatatacgatattcttctg
aggtcaaccccagaaagtcggaatatttttggacggctatcgggtgctgctggtgtttgg
gaagcaatagttcgtgcttttgagaaagatcatatcttccttggtgaggctgctcagata
atggtccaaaatgtcaattatgaaatcccgtatcagaaaaagcaggtgcagaagattcag
caacaactagcagaactagagcgcaaggaagctgatataaaaagaaatgcagccttatca
gcagctaaatatgctgaggcttgtcaagagcttggattacagggaaacaatgtgagattg
gaacttctagagactacaaaaacacttcctagtatatttagcaagtttctggaagttatt
agcagcgactgtgtgttgcaggctatggagtattattcaaattttgtcagagatgctcat
acagaaaaggataaaatgtcacggactgtgctgataaatttaggggatgttcgagaaaat
cccccttgtttgaatgtttctgcaggctctgatgtccttgattctatgaatgttcaaccg
agctctcatgaaacaaacaatatgactgaggtcatggatgttccagctgattatattgac
tgggatatttctgtggacagctctcagattgattgggatattggaactgtggaagaaaca
gatgatactggcaatggattgggtccttatgagattgttaatgccagtgagattttacag
aacatatcaccaactggtgctgtagaatctgaccagaccctgttaaagaaagaggaagat
ggcctagtaccagggatgtctgcttcagatatatcttgggatatttgtgttgagaatcca
caagttgatgaggtggaagatgttatttttccaaatgaagacatgaaaactcaggcatct
gttttagatactagaacccaaacccctgaaatcaaggaagataggagccagcttctggaa
acagagtacaggaataagattctagatgatctatttgagatgaaagcatttttaaatcaa
cgattggtggagttgaggaatgaagaaactttgtccttgcaacaccaagtccaggcagtt
gctccctttgtgctgcagcaatacacccctgatgccattcaagcaatgctatctgatgtt
tcctctgccatttccttgctaacaaataggaaaatgcaagatttgattatgattctcaac
tccaaaagatttctagatagactagtaagtacattggaggaaaaaaagcatcatgaagcg
aagttaaaagaggggttgaaggacttggccatcagacgcatggagctgcagaattcgtta
tcttcatcctggcccaagcaagaagcggctctggcaaaaactagggagctgaagaagctt
tgtgagagttctctgtcatccatgtttgatggaaggcccgtgaatattattggagagatc
aacacactattaaatagcagtatcactgtgtag
DBGET
integrated database retrieval system
