Vitis riparia (riverbank grape): 117920906
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Entry
117920906 CDS
T07274
Name
(RefSeq) prolycopene isomerase, chloroplastic
KO
K09835
prolycopene isomerase [EC:
5.2.1.13
]
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri00906
Carotenoid biosynthesis
vri01100
Metabolic pathways
vri01110
Biosynthesis of secondary metabolites
Module
vri_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
117920906
Enzymes [BR:
vri01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.13 prolycopene isomerase
117920906
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Motif
Pfam:
Amino_oxidase
NAD_binding_8
DAO
FAD_binding_2
FAD_oxidored
HI0933_like
Thi4
GDI
GIDA
Pyr_redox_2
FAD_binding_3
GMC_oxred_N
MCRA
Motif
Other DBs
NCBI-GeneID:
117920906
NCBI-ProteinID:
XP_034694490
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Position
8:complement(4518958..4536844)
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AA seq
641 aa
AA seq
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MLQFQSVDPQRNLVFHCYKLGDMNFGQVGTLGFRGDKLSSMGLGFCSCQLQLGSLRPRNL
GNRFMSGDQVKTMGLEGYKHGGVELGVYRWSRSGSCVVRPRSVLSVDEVVEREGNGRTGG
EKQYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGFYQRDGYTFDVGSSVMF
GFSDKGNLNLITQALAAVGCKMQVIPDPTTVHFHLPSNLSVRVHRQYGEFIAELTKNFPH
EKEGILKFYNECWKIFNALNSLELKSLEEPIYLFGQFFQKPLECLTLAYYLPQNAGDIAR
KYIKDPQLLSFIDAECFIVSTVNALQTPMINASMVLCDRHFGGINYPVGGVGGIAKSLAK
GLVENGSEILYKANVTSIILVQGKAVGVKLSDGREFFAKTIVSNATRWDTFGKLLKGEEL
PKEEVNFQKVYVKAPSFLSIHMGVKAEVLPPDTDCHHFVLENDWTRLEEPYGSIFLSIPT
MLDASLAPEGRHILHIFTTSPIEDWKGLPLKDYEAKKELVADEIISRLEKKLFPGLKSSI
VFKEVGTPKTHRRYLARDNGTYGPMPRRTPKGLLGMPFNTTAIHGLYCVGDSCFPGQGVI
AVAFSGVMCAHRVAADIGLEKKSPVLDAALLRLLGWLRTLA
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgctccaatttcaatctgttgatcctcaaagaaacctggtttttcattgttacaagctg
ggtgacatgaatttcggtcaagtgggaaccctgggtttcagaggtgacaagttgagtagc
atgggtttagggttttgcagttgtcagttacagttgggcagtttgaggcccagaaatttg
ggaaatagatttatgtctggtgaccaggtgaaaaccatgggattggagggttacaagcat
ggtggtgttgaattaggggtctataggtggagtaggagtggaagctgtgttgtgaggcct
agatcagtgctgagtgtggatgaagtggtagagagggaagggaatggaagaacaggaggg
gaaaagcaatacgatgccattgttatcgggtcgggaattggagggttggttgcggcaaca
cagctggcagtgaagggagctagggtgttggtgctggagaagtatgtgattcctggtggg
agctctgggttctaccagagagatgggtatacgtttgatgttgggtcttctgtgatgttt
ggtttcagcgataagggaaatttaaatttaataacccaagcattggcagcagttggatgt
aagatgcaggtgatacctgatccaactactgtccatttccatttacccagtaacctttcg
gtccgagtacatagacaatacggtgaattcattgcagaacttaccaagaattttccccat
gaaaaggaagggatcctcaaattctacaatgaatgttggaagatcttcaatgccctaaac
tcattggaattgaagtcacttgaggagccaatctaccttttcggacagttctttcagaag
cctcttgaatgcttgacacttgcctattatttgccccaaaatgctggagacatagcccgc
aagtacataaaggatccccagctgttatctttcatagatgctgagtgttttatagtgagc
acagttaatgctttgcagacaccaatgatcaatgcgagcatggttctatgtgataggcat
tttgggggaattaactaccctgttggtggtgttggtggaattgctaagtccttggcaaaa
ggtctagttgaaaatggcagtgaaatactttataaggcaaatgtgactagcattatattg
gtgcagggaaaggccgtgggagtgaagctttcagatggaagggagttctttgccaaaacc
atagtatctaatgctactagatgggatacatttggaaagcttttaaagggtgaagaactt
ccaaaagaagaggtgaactttcaaaaggtctatgttaaggccccatcatttctttccatt
cacatgggggttaaagctgaggttttgccacctgatacagattgccaccattttgttctt
gagaatgactggacaaggttagaggagccatatggaagcatatttttgagcattccaact
atgcttgatgcatcattggctccagaaggtcgccatattcttcatatttttacaacttct
cccatagaggactggaagggactccctctaaaagactatgaggcaaagaaggaacttgtg
gcagatgaaatcataagcagattggaaaaaaaactatttccagggctcaaatcatccatt
gtttttaaggaggtagggacaccaaaaacacacaggcgttatcttgctcgagataatggc
acatatggaccaatgcctcgcagaacacctaagggattattgggaatgccattcaataca
actgctatacatggtctctactgtgttggggatagctgctttccaggacaaggtgttata
gctgtagccttttcaggtgtaatgtgtgcacaccgagtggctgcagatattgggcttgag
aagaagtccccagtgctggatgctgcccttcttcgactacttggttggttaaggacattg
gcatag
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