Vitis riparia (riverbank grape): 117920958
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Entry
117920958 CDS
T07274
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri00040
Pentose and glucuronate interconversions
vri01100
Metabolic pathways
Module
vri_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
117920958
Enzymes [BR:
vri01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
117920958
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
117920958
NCBI-ProteinID:
XP_034694570
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Position
8:complement(21414092..21416866)
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AA seq
441 aa
AA seq
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MSLQRRFIPFLIVFLLSFPCYYGLQGNPPYHYLDDAYGYASSQAYDKWPWRKFGSKIMGS
KRIGEVGRSLASVKTVSVNDYGAKGDGSDATEAFKKAWEAACSSQGSVLVVPKNNYLLKP
ITFEGPCKSSITVQISGTLQASTDRSAYSNDLTRWLVFENVQNLAVQGGGTINGNGKIWW
ENSCKVDDDLSCKDAPTALTFYNCKTLVVKNLKIENAQQIHVSFEKCVGVQASGLTVTAP
GDSPNTDGIHVTDTQNIQISSSVIGTGDDCISIVSGTQNLQATGITCGPGHGISIGSLGY
GNSEALVSDITVNGATLSGTTNGVRIKTWPGGSGSASNIKFQNIEMHDVDNPIIINQKYC
DDDKPCESESQAVQVQNVLYQNIKGTSSSSEAIELDCSSKFPCQGIVLQDIDIETGGGKA
TKAVCSDAKVTEKGDVSPSCT
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgtctctacaaagacgcttcatcccatttctcatcgtctttctgctttctttcccatgc
tactacggtttgcaagggaacccaccttaccattatcttgacgacgcatatggctatgct
tcttcccaggcgtatgacaagtggccatggcgcaaatttggaagtaaaatcatgggctcc
aagaggattggtgaagtgggtagatctttggcttcagttaaaacggttagcgtgaatgat
tatggagctaaaggtgatggaagtgatgccacagaggcattcaagaaagcttgggaggca
gcttgttcatctcaaggatctgtcctagtggtgcccaaaaacaactatctccttaagcca
attacatttgaaggtccttgcaaatccagtattacagtgcagatatctggaactctccag
gcatctactgatcgatccgcctacagtaacgatttgacccgctggcttgtctttgaaaat
gtccaaaacttagcggttcaaggtggtggaaccatcaatggaaatgggaagatatggtgg
gaaaactcttgcaaagtggacgatgatctttcttgcaaggatgcaccaacggccttaacc
ttctataactgcaagaccttggtagtgaagaacctcaagatcgaaaatgcccagcaaatt
catgtttcgtttgaaaaatgcgtgggtgttcaagcttcgggtctcactgtaactgcacca
ggggacagccccaacactgatggaatccatgtgactgacacccaaaatatccagatttca
agctcagttataggaacaggtgacgactgtatttcaattgtgagtggaacccagaacttg
caagccactggtatcacctgtggaccaggccatggaatcagtattggaagcttaggatat
ggaaactcagaggctctggtttcagatattacagtgaacggggcaaccctttcgggaacc
acaaatggagttagaatcaagacatggccgggagggtctgggagcgcaagcaacatcaaa
ttccagaacattgaaatgcatgatgtggacaaccctataataataaaccaaaagtactgt
gacgacgacaaaccatgcgaatcagagagccaggcagttcaagtgcaaaatgtgttgtac
cagaacatcaaaggaacaagttcttcaagtgaggctatagaacttgattgtagcagcaag
tttccatgtcaggggattgtgctgcaagacattgatatagaaactggaggaggaaaagca
accaaggctgtgtgcagcgatgccaaagtgactgaaaaaggagatgtgtctccaagttgc
acttga
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