Vitis riparia (riverbank grape): 117921012
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Entry
117921012 CDS
T07274
Name
(RefSeq) hydroxymethylglutaryl-CoA lyase, mitochondrial-like isoform X1
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri00280
Valine, leucine and isoleucine degradation
vri00650
Butanoate metabolism
vri01100
Metabolic pathways
vri04146
Peroxisome
Module
vri_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
117921012
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
117921012
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
117921012
Enzymes [BR:
vri01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
117921012
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Motif
Pfam:
HMGL-like
Motif
Other DBs
NCBI-GeneID:
117921012
NCBI-ProteinID:
XP_034694639
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Position
8:complement(12273505..12294255)
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AA seq
451 aa
AA seq
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MLSVKALDKFLRLRSFFSCTSIPIMSNLEEPAVFGKLSRFGGDKVKMFSSNPCMIRENGT
GIGDCWLEGSSLHSPKSSNYEYTEEVCPWRRQMRNVSRGDFLNRTPANMSRNHRVFRSLP
DACYLPDRPYSSHCNDECTRDNKLLRSMPGFVKIVEVGPRDGLQNEKDIVPTVVKVELIK
MLVSSGLPIVEATSFVSPKWVPQLADAKDVMEAIRTVEGGTFPVLTPNLKGFEAAVAAGA
KEVAIFASASESFSKSNINCSIEDSLTRYRDVALAARKLSIPVRGYISCVVGCPLEGVVS
PSKVTYVAKELYDMGCYEISLGDTIGVGTPGTVIPMLEDVIDVVPIEKLAVHFHDTYGQA
LSNILASLQMGITTVDSSVSGLGGCPYAKGASGNVATEDVVYMLNGLGVKTNVDLGKLML
AGDFICQHLGRQSGSKTAIALSRIRSHASKL
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgctatcagtgaaggctttggataaatttttacggttgagaagtttcttttcttgtact
tctattccaataatgtcaaatttggaggagccagctgtttttggcaagctttcaagattt
ggtggtgataaagttaaaatgttttcctctaatccttgcatgatcagagaaaatggtaca
ggaatcggagattgctggcttgaagggtcgagccttcactctccaaaaagtagcaattat
gagtatacagaagaagtatgcccttggagaagacaaatgaggaatgtgtcacggggggat
ttcttaaatcgtacacctgcaaacatgagtagaaatcatagagtatttcgaagtcttcct
gatgcttgttatttgccagatcgtccttatagctcccattgcaatgatgaatgcacaagg
gataataagttgctaagaagtatgccaggatttgtgaagattgtggaagttggtcccaga
gatggattgcaaaatgagaaggacattgtgcctactgttgtaaaggttgagctgattaag
atgctagtttcttcaggattgcctattgtagaggctacaagttttgtctcaccaaaatgg
gtgccacagctagcagatgcaaaggatgtaatggaagccattcgaactgttgaaggtggt
acatttcctgtgttgacacctaatcttaaaggctttgaagcagctgttgcagctggagct
aaggaagtggccatctttgcctctgcttctgagtcattttcaaagtcaaacatcaattgt
agcattgaagatagtctcactcgttaccgcgatgttgctcttgctgctagaaagctctca
atccctgttcgtggatacatatcgtgtgttgtgggttgtccactggaaggagtagtatct
ccgtcaaaagtaacatatgtggctaaagaactttatgatatgggttgctatgaaatttcc
cttggcgatactattggtgttggtactcctggtactgtcattccaatgcttgaagatgtt
attgatgttgttcctattgaaaagcttgccgtccattttcacgatacttatgggcaggct
ctttcaaatattctagcatcactccaaatggggatcaccacagtggattcatcagtatct
ggtcttgggggctgcccatatgctaaaggtgcttctgggaatgttgcgactgaggatgtt
gtttacatgctaaatggactcggggtgaagacaaatgtggatcttgggaagctcatgtta
gctggggatttcatctgtcagcatttgggacgacaatctggttcaaagacagcaattgcc
ttgagtagaatcagaagtcatgcctccaagctatga
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