Vitis riparia (riverbank grape): 117921072
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Entry
117921072 CDS
T07274
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri00040
Pentose and glucuronate interconversions
vri01100
Metabolic pathways
Module
vri_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
117921072
Enzymes [BR:
vri01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
117921072
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
117921072
NCBI-ProteinID:
XP_034694745
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Position
8:complement(21393876..21396723)
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AA seq
442 aa
AA seq
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MSLQRRFIPFLIVFLLSFPCYYGLQGNPPYDYLDDAYAYDSSRAYESWPWRKFGSKIMGS
KRIDKVGRSLASVKTVSVNDYGAKGDGSDATEAFKKAWEAACSSQGSVLVVPKNKNYLLK
PITFEGPCKSSITVQIYGTVQASADRSAYSNDMTRWLVFENVQNLAVQGGGTINGNGKTW
WEKSCKVNDDLPCKDAPTALTFYNCKNLVVKNLKIQNAQQMHVSFEKCVGVQASGLTVTA
PGDSPNTDGIHVTDTQNIQISSSVIGTGDDCISIVSGTQNLQATGITCGPGHGISIGSLG
SGNSEAHVSDITVKGATLSGTTNGVRIKTWPGGSGSASNIKFQNIEMHNVKNPIIIDQKY
CDGDKPCKSQSRAVQVQNVLYQNIKGTSSSSEAIQLDCSDKFPCQGIVLQVIDIEIGGGK
AAQAVCNNAKVTEKGDVSPSCT
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgtctctacaaagacgcttcatcccatttctcatcgtctttctgctttctttcccatgc
tactacggtttgcaagggaacccaccttacgattatcttgacgacgcatatgcctatgat
tcttcccgggcgtatgagagctggccatggcgcaaatttggaagtaaaatcatgggctct
aagaggattgataaagtgggtagatctttggcttcagttaaaacggttagcgtgaatgat
tatggagctaaaggtgatggaagtgatgccacagaggcattcaagaaagcttgggaggca
gcttgttcatctcaaggatctgtcctagtggtgcccaaaaacaagaactatctccttaag
ccaattacatttgaaggtccttgcaaatccagtattacagtgcagatatatggaactgtc
caggcatctgctgatcgatccgcctacagtaacgatatgacccgctggcttgtctttgaa
aatgtccaaaacttagcggttcaaggtggtggaaccatcaatggaaatgggaagacatgg
tgggagaaatcttgcaaagtgaacgatgatcttccttgcaaggatgcacctacggcctta
accttctataactgcaagaacttggtagtgaagaacctcaagatccaaaatgcccagcaa
atgcatgtttcttttgaaaaatgcgtgggtgttcaagcttcgggtctcactgtaactgca
ccaggggacagccccaacactgatggaatccatgtgactgacacccaaaatatccagatt
tcaagctcagttataggaacaggtgacgactgtatttcaattgtgagtggaacccagaac
ttgcaagccactggtatcacctgtggaccaggccatggaatcagtattggaagcttagga
tctggaaactcagaggctcacgtttcagatattacagtgaagggggcaaccctttcggga
accacaaatggagttagaatcaagacatggccgggagggtctgggagcgcaagcaatatc
aaattccaaaacatcgaaatgcataatgtaaagaaccctataataatagaccaaaagtac
tgtgacggggacaaaccatgcaaatcacagagccgggcggttcaagtgcaaaatgtgctg
taccagaacatcaaaggaacaagttcttcaagtgaggctatacaacttgattgcagcgac
aagtttccatgtcaggggattgtgctgcaagtcattgatatagaaattggaggaggaaaa
gccgcccaagctgtgtgcaacaatgccaaagtgactgaaaaaggagatgtgtctccaagt
tgcacttga
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