Vitis riparia (riverbank grape): 117921101
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Entry
117921101 CDS
T07274
Name
(RefSeq) serine/threonine-protein phosphatase PP1-like
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117921101
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
vri01009
]
117921101
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vri03021
]
117921101
03019 Messenger RNA biogenesis [BR:
vri03019
]
117921101
03041 Spliceosome [BR:
vri03041
]
117921101
Enzymes [BR:
vri01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
117921101
Protein phosphatases and associated proteins [BR:
vri01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
117921101
Transcription machinery [BR:
vri03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
117921101
Messenger RNA biogenesis [BR:
vri03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
117921101
Spliceosome [BR:
vri03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
117921101
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Motif
Other DBs
NCBI-GeneID:
117921101
NCBI-ProteinID:
XP_034694787
LinkDB
All DBs
Position
8:347399..350164
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AA seq
297 aa
AA seq
DB search
MEGLDGLIERLLEARKCRGKRIQMSESEIRQLCITAKDVFLSQPNLLELEAPINVCGDIH
GQYSDLLRLFEYGGFPPDSNYLLLGDYVDRGKQSIETISLLLCYKIKYPDNFFLLRGNHE
CASINRIYGFYDECKRRFSVRLWKIFTDCFNCLPVAAIIENKILCMHGGLSPEIESLDQI
RAIERPVDVPDQGLLCDLLWADPDRDIKGWGENDRGVSYTFGADKVAEFLKKHDLDLICR
AHQVVEDGYEFFAERQLVTIFSAPNYCGEFNNAGALMSVDASLLCSFQILKPFKAKE
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atggaagggttggatggtttgatagagaggctattggaagcaagaaaatgtagaggaaaa
agaatacagatgagtgagtctgagatccgccaactttgtattactgccaaggatgtcttc
ctcagccagcccaatctcttggaattagaagctcccatcaatgtttgtggagacatacat
ggacagtactcagacctcctccggttattcgaatatgggggttttccccctgactccaac
tacctactcctgggagactacgtggatagaggaaaacaaagtatagagacaatatccctt
ctcctctgctacaagatcaagtaccctgataacttctttctcctccgaggaaaccatgaa
tgtgcttccatcaacagaatctacggcttctacgacgagtgcaagcgccgcttcagtgtc
cgcctgtggaagattttcaccgactgcttcaactgtttaccggtcgccgctatcatcgag
aataaaatattgtgcatgcatggtgggctgtcgccggagatagagagcttggatcagata
agggccatagagaggccggtggatgtgccggaccaaggcctcttgtgtgatctgctgtgg
gctgatcctgacagagatatcaagggatggggggagaatgataggggtgtttcctatact
tttggagctgataaggtggccgaattcttgaagaagcatgatcttgatctcatatgtcga
gcccatcaggttgtggaagatggatacgaattctttgcagagaggcagctggtaacaata
ttctcagctccaaactactgtggagaattcaacaatgcaggggcactgatgagtgtagat
gcaagtttgctttgctcatttcagattctcaaacccttcaaagcaaaggagtga
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integrated database retrieval system
