Vitis riparia (riverbank grape): 117921195
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Entry
117921195 CDS
T07274
Name
(RefSeq) regulation of nuclear pre-mRNA domain-containing protein 1B-like
KO
K15559
regulator of Ty1 transposition protein 103
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vri03021
]
117921195
Transcription machinery [BR:
vri03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
117921195
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
CID
CTK3
Drf_FH3
CREPT
Motif
Other DBs
NCBI-GeneID:
117921195
NCBI-ProteinID:
XP_034694904
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Position
8:1218490..1281921
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AA seq
563 aa
AA seq
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MSNDVFDGQLLAEKLSKLNNSQQSIESLSRWCISHRKKAKQIVETWDKLFNSSQKEQCVS
FLYLANDILQNSRRKGSEFVNEFWKVLPLALKHVYDNGDEYGKKAVSRLVDIWEERKVFG
SRGQGLKDEMLGKSPPPLLVSNGKNSNPIKIVKRDSQSVRIKLSIGGMPEKIVTAFQTVH
DEQVNEEAVLNKCKTAVQHVGKLEVDAGNTSGEGNQQRAALVDELKEQENILQQCVVQLE
SSEATRAALVSQLKEALLDQESKLGLVRAQLQVARGRIEQASNMRQRLTSPTVAGPQTIR
MNPQTEAPMAVEPNMPSVQATTTPPKALLTQPVISFAPLKTTEEDSKKAAAAAVAAKLAA
STSSAQMLTSVLSSLVAEEAASNGGLKSSGFASIFSPEKRPRLEKPMPVSDGNNSDAGSA
SYFTPVQQQSMANMPLAPPTSVPPMSQANQMQAPFPPPPPPPPPLPLVNPPAKQYVQSSG
MMVGVMPYGYGTTSLPPPPPMLSHVPMGLSAPAPQPPQQLQSPQLQQQQQSQQPATGGGY
YRPPGIAFYGQSHQPTPPPVPRQ
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacgacgtttttgatggacagttgttagccgagaagttgtcgaaactcaacaac
tcacaacaaagcatagagtcactgtctcgttggtgcatttctcaccggaagaaagcaaaa
cagattgttgaaacatgggataaattgttcaattcttcccagaaagagcagtgcgtttca
tttttatatttggcaaatgacatattgcaaaacagtcgaagaaagggaagcgagtttgta
aatgaattctggaaagtccttcctttagctctcaagcatgtttatgacaatggtgatgaa
tatggaaaaaaggcagtctctagactggttgacatatgggaagaaaggaaagtttttgga
tctcggggtcaaggtcttaaagatgaaatgctgggtaagagtcctcctccattgttggtg
agcaatggaaagaattccaatcccataaagatagtgaagagggactctcagtcagtaaga
attaaattatctattggaggtatgcctgagaaaatagtaactgctttccaaactgttcat
gatgaacaagtcaacgaagaggctgtcctaaataagtgtaaaactgctgtccaacatgtg
ggaaaattggaggtagatgctgggaatacctctggtgaaggaaatcagcagcgagctgcc
ttggtggatgaactaaaggagcaggaaaacatcctccagcaatgtgttgtgcaacttgaa
agttctgaagcaactagggctgcgttggtctctcagcttaaagaagcacttctggatcaa
gaatcaaagctgggacttgttcgcgctcagttgcaggttgccagaggtcggattgagcaa
gcaagcaatatgaggcagagactaacatcacccactgttgccggcccccaaaccatccga
atgaacccgcaaacagaagccccaatggctgtagaaccaaacatgccttcagttcaagca
accaccacccctccaaaagctcttcttacccaacctgtgatttcttttgcacctctgaaa
actactgaagaagatagcaaaaaagcagcagcagctgccgttgctgctaagctcgctgcc
tctacatcctccgcacagatgcttacctctgtgctctcttcccttgttgcagaagaagct
gcctcgaatggtggtttaaaatcatctggatttgcctccatttttagtccagaaaaaagg
cccaggcttgagaagccgatgcctgtttctgatggtaacaattctgatgcaggcagtgcc
tcatattttacccctgtacaacaacaatcaatggccaacatgccacttgcacccccaaca
agcgtaccgccaatgtcccaagccaaccagatgcaagctccattccctccaccaccacct
cccccaccacctctacccctggtgaatccaccagcgaaacaatacgtccaatcctccggt
atgatggtcggagtgatgccctatgggtatggtactaccagcttgccacctccacctccc
atgctttctcatgttccaatgggtttatcagcaccagccccacaaccaccacagcagcta
caatctccacaactgcagcagcagcagcagtcacagcagccagccaccggaggaggctat
taccggccacctggcattgcattctatgggcaaagccatcagccaacaccaccccctgtg
cccaggcagtga
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