Vitis riparia (riverbank grape): 117921245
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Entry
117921245 CDS
T07274
Name
(RefSeq) probable acyl-activating enzyme 16, chloroplastic
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri00061
Fatty acid biosynthesis
vri00071
Fatty acid degradation
vri01100
Metabolic pathways
vri01212
Fatty acid metabolism
vri04146
Peroxisome
Module
vri_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
117921245
00071 Fatty acid degradation
117921245
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
117921245
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
vri01004
]
117921245
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vri04147
]
117921245
Enzymes [BR:
vri01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
117921245
Lipid biosynthesis proteins [BR:
vri01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
117921245
Exosome [BR:
vri04147
]
Exosomal proteins
Exosomal proteins of breast milk
117921245
Exosomal proteins of breast cancer cells
117921245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
117921245
NCBI-ProteinID:
XP_034694974
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All DBs
Position
8:2970222..3046122
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AA seq
725 aa
AA seq
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MSPSLTLSPSPAPKMAFISSPPLQFQLTTPLLHTKSLRRLPRAFRFRVFSQSMTEERQIR
KFSPFLEREFLLGDGVLASDEWKAVPDIWRSSAERYGDRVALVDPYHDPPSNMTYKQLEQ
EILDFSEGLRAIGVKPDEKLALFADNSCRWLIADQGIMAIGAINVVRGSRSSVEELLQIY
IHSESVALAVDNPELFGRIAETFCSRAAIRFVVLLWGEKSCLPSEVMDRVPVFNYKEIID
LGRECRSVFLDSHYARKNYICEAISSNDIATLVYTSGTTGNPKGVMLTHQNLLHQIKNLW
DIVPAEPGDRFLSMLPSWHAYERASEYFIFTHGIEQVYTTVPNLKEDLRRYQPQYLISVP
LVYETLYSGIQKQISTSSTVRKLVALTFIRISLAYMELKRIYEGKFLQKSQKQYSYIASI
FDWLWAKIIAAILWPVHMLGKKLVYSKIHSAIGISKAGVSGGGSLPSHVDRFFEAIDIKV
QNGYGLTECSPVTAARRPTCNVLGSVGHPIRYTEIKIVDSETDELLPPGSKGIVKVKGPH
VMKGYYKNELATKKVLDEDGWLNTGDIGWIAPHHSVGRSRHCGGVIVLEGRAKDTIVLST
GENVEPTELEEAAMRSTLIQQIVVIGQDQRRLGAIIVPNKEEVLAAAKRLSILNANTSEL
SKEKITGLLHEEIRTWTEGFSFQIGPILVVDEPFTIDSGLMTPTMKIRRDRVAALYQEQI
AHLYN
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgtctccatccctcactctctctccttcccccgctccaaagatggcattcatctcttct
cctccgcttcagtttcaactcaccaccccgcttttacataccaaatccctccgacgcctc
cctcgcgccttcagatttcgagttttttcccaatccatgacagaggaaaggcagataagg
aagttctcaccttttctagaaagagaatttctgttgggagatggtgttttggcctctgat
gagtggaaagcagttcctgacatttggaggtcctcggcagaaagatatggtgatcgggta
gcattggtggatccatatcatgacccaccttcaaatatgacttacaaacagctagagcaa
gaaattttggacttttctgaaggcttaagagctattggagtaaagccagatgaaaagctt
gcactttttgctgataattcatgtcggtggctcattgcagatcaaggtataatggccatt
ggagcaattaatgtggtaaggggctcaaggtcatctgttgaagaacttttgcaaatatac
attcattctgaaagtgttgcacttgctgtggacaatcctgagttgttcggtcggattgct
gaaacattctgttccagagcagctataagatttgttgttctactctggggggagaaatct
tgcctgcctagtgaagttatggacagagtgcctgtttttaattacaaggagatcatagat
ttgggacgagagtgccgtagtgtttttcttgattctcattatgctaggaaaaactatatt
tgtgaagcaatcagctctaatgatattgctacacttgtatatacaagtgggaccacggga
aatccaaaaggtgttatgcttacacatcaaaatcttttgcaccagataaagaacttgtgg
gatattgttcctgctgaacctggggatagatttctaagcatgctcccatcttggcatgcg
tatgaacgagctagtgagtatttcatatttacacatgggattgagcaagtatacactact
gtgccaaacttgaaggaagatttgcgacgttatcaaccgcagtacctaatctctgttcct
ttggtatatgagactctttacagtgggattcaaaagcagatttctactagctccactgtc
cgcaagcttgttgcacttacatttataaggatcagtttggcatacatggagttgaagagg
atttatgaggggaagtttctacagaagagtcagaagcaatattcatacattgcttcaata
tttgactggttatgggcaaaaataattgctgcaatcttgtggccagtccatatgttgggc
aagaagctcgtctatagtaaaattcattctgctataggaatatcaaaggctggcgtaagt
ggaggaggtagtttgccttctcatgttgacagattttttgaggcaattgacataaaagtt
cagaatggatatggtttaacagagtgttctcctgtcactgctgctcggcgacctacctgt
aatgttcttggctcagttgggcatccaattcgatatacagaaatcaaaattgtagattct
gaaactgatgaacttctgccacctggttcaaagggcattgtaaaagtaaaggggccacat
gtcatgaaaggctactacaagaatgaattggctacaaaaaaagtcttagatgaggatggt
tggctaaacacgggtgatattggttggattgcacctcaccactcagtaggacgaagtcgt
cactgtggaggtgttattgttcttgaaggacgtgctaaggatactatagttctttcaaca
ggtgaaaatgttgaacctacagagctggaagaagctgccatgaggagtactctaattcaa
caaattgttgttattggccaggatcaacgacgtcttggagctataattgttccaaacaaa
gaagaggttttagcagcagcaaaaagattgtcaattttaaatgccaatacctccgaactt
agtaaggaaaaaattacaggcctgttacatgaagaaataagaacttggactgagggattc
tcttttcaaatagggcctatcctagtcgttgatgagccttttacgatcgacagtgggttg
atgactccaaccatgaaaatccgaagggacagagtagcagctctataccaggagcaaata
gcccatctctacaactaa
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