Vitis riparia (riverbank grape): 117921343
Help
Entry
117921343 CDS
T07274
Name
(RefSeq) putative E3 ubiquitin-protein ligase SINAT1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117921343
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vri04121
]
117921343
Enzymes [BR:
vri01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117921343
Ubiquitin system [BR:
vri04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
117921343
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
FAIM1
zf-C3HC4_2
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
117921343
NCBI-ProteinID:
XP_034695103
LinkDB
All DBs
Position
8:20608123..20612191
Genome browser
AA seq
315 aa
AA seq
DB search
MAPGGSTYKEVLESHSTATDYDIAMTKADTNLTPAKTTAGLSGKKGTSSPNGVHELLECP
VCTSLMYPPIYQCPSGHTLCSNCKSRVHNCCPTCRHELGDIRCLALEKVAESLELPCRYQ
SLGCHDIFPYYSKLKHEQQCRFHPYNCPYAGFECSVTGDIPTLVEHLKGDHKVDMHDGCT
FNHRYVKSNPQEVENATWMLTVFNCFGKQFCLHFEAFQLGTAPVYMAFLRFMGDDNEAKK
FSYSLEVGGNSRKLIWQGVPRSIRDSHRKVRDSQDGLIIQRNLALYFSGGDRQELKLRVT
GRIWKESELWKDNGC
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atggctcctggaggcagcacttacaaagaagttcttgagtctcactccacagcgactgac
tatgacatagcaatgacaaaagcagacactaatcttacacctgcaaaaactactgctggc
ttgagtggaaaaaagggaacctcttcacccaatggtgtccatgagctacttgaatgtcct
gtatgcacgagtttaatgtaccctccgatctaccagtgtccaagtggccacaccttatgt
tcaaactgcaagagtagagtgcacaactgttgcccaacttgccgccatgagcttggagat
ataaggtgtttggctttggagaaagttgcagagtcattagaacttccctgcagatatcaa
agtctaggttgtcatgatatctttccatactacagcaagctcaagcacgagcaacagtgt
cgattccatccatacaactgcccatatgctgggtttgagtgctctgtcactggggacatc
ccaacccttgttgagcatctcaagggtgatcacaaggttgacatgcacgatgggtgtacc
ttcaaccatcgatatgtcaaatcaaatcctcaggaagttgaaaatgccacatggatgcta
actgtgttcaactgttttgggaagcaattctgcttgcattttgaggctttccagcttgga
acagcaccagtctacatggcctttctgcgattcatgggtgatgacaatgaagcaaagaag
ttcagctacagtttggaagtcggtggcaacagccgcaagctaatatggcagggagttcca
agaagtatcagggacagtcataggaaagttcgtgacagtcaggatggactcatcattcaa
aggaacttggctctctacttctctggaggtgatcggcaagagctgaagctgagggtcacc
ggccgaatttggaaagaaagtgaattatggaaagacaatggatgttag
DBGET
integrated database retrieval system
