Vitis riparia (riverbank grape): 117921461
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Entry
117921461 CDS
T07274
Name
(RefSeq) DNA repair protein RadA-like
KO
K04485
DNA repair protein RadA/Sms
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vri03400
]
117921461
DNA repair and recombination proteins [BR:
vri03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
117921461
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
ChlI
DnaB_C
Zn_ribbon_LapB
Lon_C
NACHT
AAA_22
AAA_16
AAA
SLFN-g3_helicase
AAA_19
NTPase_1
AAA_29
ABC_tran
Zeta_toxin
nSTAND3
Isochorismatase
AAA_30
Motif
Other DBs
NCBI-GeneID:
117921461
NCBI-ProteinID:
XP_034695223
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Position
9:3688184..3698733
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AA seq
629 aa
AA seq
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MQISDMRSLRTFYTQKHLFNPKKHIPISLSPLISFQSLQNPKFSRHFRCTNHRRSEESTS
LDADSPSIGIGSSSPDTETNSSRRRTWTVFNTEGSQYSDRQESGSRSGAERSEVSVNKGF
GSVEKARFGGRYGLASSDGGVVRGRKKGKSKVCWVCSDCGYSDGQWWGACRECNKVGTMK
QFSAGESGNGGSRVSGFEVSDNVIRSWLPQQPTEVQPLRLTDVNRGINQMNWRIPLHGPF
GYEVARVLGGGLVPGSLVLVGGDPGAGKSTLLLQIAAIIAEGHDIGGSSPVVYVSGEESV
EQIGNRADRMRIDTEELFLYSSTDIEDILGQVHLLSPRALVVDSIQTVYLKGVIGSAGGL
SQVKECTSALLRFAKKTNIPVFLIGHVTKSGDIAGPRVLEHIVDVVLYMEGEKHSSHRLL
RSVKNRFGSTDELGVFEMTQLGLQVVSNPSELFLSEQNSDSEILAGLAVAVIMDGSRSFL
LEIQALCLSGSTVARQVNGVPASRADMIIAVLMKQAGLKLQDNGIFLNVVSGVTLAETAG
DLAVAAAICSSFLEFPIPNGIAFIGEIGLGGELRTVPRMEKRVNTVAKLGYKKCIVPKAA
EKSLPTLEDMNIEIVGCRNMKEVINTVFV
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatctcagatatgcgatctctcagaacattctacacccaaaaacaccttttcaat
ccaaaaaaacacatacccatttctctctctcctctcatctccttccaatctctccaaaac
cctaaattttcccgccatttccgttgcaccaaccaccgccgcagcgaagaatcaacgagc
cttgacgccgattctccgagtatcgggatcggttcaagttcacctgatacagaaaccaat
tcaagcagacgtagaacttggaccgtgttcaatacggaaggcagtcagtacagtgacaga
caagaatctgggtcgagaagtggagctgaaaggagcgaggtttcggtaaataagggtttt
gggagtgtggagaaggcgagattcggtggtaggtatgggctagcttcgagcgatggcggt
gttgtgaggggtaggaagaaggggaagagtaaggtttgctgggtgtgttcggactgtggg
tattcggatgggcagtggtggggggcgtgtagggagtgcaataaagtgggtacaatgaag
cagttttcagcaggggaaagcggcaatggtggctcgagggtgagcgggttcgaggtgtcg
gataatgtgattcgatcgtggttaccccagcagcccactgaggtgcaacctttgagattg
acggatgtgaaccgggggattaatcagatgaattggaggattcccttgcatgggcccttt
ggatatgaagttgctagggtgcttggtggtggtcttgtaccaggttctttggttttggtt
gggggtgatcctggtgctggcaagagtacactgttgttacagattgctgcaataatagct
gaagggcatgatattggtggatcaagtccagttgtgtatgtatctggtgaagagagtgtc
gaacaaattggaaatagagctgaccgcatgaggattgacacagaagagcttttcttatat
tcaagtactgatattgaggacatattgggacaagttcatcttctttcccccagggctcta
gttgttgattccattcaaactgtatatttaaaaggagtcatcggaagtgcaggaggtctc
tctcaggtgaaagaatgcacatcagccttgctgcgttttgctaagaagactaacatccct
gtgtttttgattggacatgtgacaaaatctggggacatagctgggcctcgtgtcttggag
cacattgttgacgttgttttatatatggaaggggagaagcactcatctcatcgattgctt
cggtctgtgaagaatcggtttgggtccactgatgagcttggagtgtttgaaatgacacaa
ttgggactgcaagttgtttcaaaccccagtgagctgttcttaagtgagcagaactcagat
tctgagattttagctggacttgcggttgctgtaattatggatggatctcgatcttttctc
ctggaaattcaggcattatgtctatctggatcaacagttgcaaggcaagttaatggggtt
ccagcgagcagagctgatatgattattgcggttctcatgaagcaagctggtctaaagctc
caagacaatggcatctttttaaatgttgtaagtggtgtgacactggcagagaccgctggg
gatcttgctgtagcagctgcaatttgcagcagcttcttggagtttcctattcccaatggc
attgcattcattggagaaatcggccttggtggtgaacttcgcacggtacccagaatggag
aaaagggtgaacacagtagcgaaactgggatacaaaaaatgcatagtcccaaaagcagct
gaaaaatctctaccaactcttgaggatatgaacattgagattgtgggctgcaggaatatg
aaagaggttatcaacacagtttttgtctga
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