KEGG   Vitis riparia (riverbank grape): 117921461
Entry
117921461         CDS       T07274                                 
Name
(RefSeq) DNA repair protein RadA-like
  KO
K04485  DNA repair protein RadA/Sms
Organism
vri  Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:vri00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vri03400]
    117921461
DNA repair and recombination proteins [BR:vri03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     117921461
SSDB
Motif
Pfam: AAA_25 ATPase ChlI DnaB_C Zn_ribbon_LapB Lon_C NACHT AAA_22 AAA_16 AAA SLFN-g3_helicase AAA_19 NTPase_1 AAA_29 ABC_tran Zeta_toxin nSTAND3 Isochorismatase AAA_30
Other DBs
NCBI-GeneID: 117921461
NCBI-ProteinID: XP_034695223
LinkDB
Position
9:3688184..3698733
AA seq 629 aa
MQISDMRSLRTFYTQKHLFNPKKHIPISLSPLISFQSLQNPKFSRHFRCTNHRRSEESTS
LDADSPSIGIGSSSPDTETNSSRRRTWTVFNTEGSQYSDRQESGSRSGAERSEVSVNKGF
GSVEKARFGGRYGLASSDGGVVRGRKKGKSKVCWVCSDCGYSDGQWWGACRECNKVGTMK
QFSAGESGNGGSRVSGFEVSDNVIRSWLPQQPTEVQPLRLTDVNRGINQMNWRIPLHGPF
GYEVARVLGGGLVPGSLVLVGGDPGAGKSTLLLQIAAIIAEGHDIGGSSPVVYVSGEESV
EQIGNRADRMRIDTEELFLYSSTDIEDILGQVHLLSPRALVVDSIQTVYLKGVIGSAGGL
SQVKECTSALLRFAKKTNIPVFLIGHVTKSGDIAGPRVLEHIVDVVLYMEGEKHSSHRLL
RSVKNRFGSTDELGVFEMTQLGLQVVSNPSELFLSEQNSDSEILAGLAVAVIMDGSRSFL
LEIQALCLSGSTVARQVNGVPASRADMIIAVLMKQAGLKLQDNGIFLNVVSGVTLAETAG
DLAVAAAICSSFLEFPIPNGIAFIGEIGLGGELRTVPRMEKRVNTVAKLGYKKCIVPKAA
EKSLPTLEDMNIEIVGCRNMKEVINTVFV
NT seq 1890 nt   +upstreamnt  +downstreamnt
atgcaaatctcagatatgcgatctctcagaacattctacacccaaaaacaccttttcaat
ccaaaaaaacacatacccatttctctctctcctctcatctccttccaatctctccaaaac
cctaaattttcccgccatttccgttgcaccaaccaccgccgcagcgaagaatcaacgagc
cttgacgccgattctccgagtatcgggatcggttcaagttcacctgatacagaaaccaat
tcaagcagacgtagaacttggaccgtgttcaatacggaaggcagtcagtacagtgacaga
caagaatctgggtcgagaagtggagctgaaaggagcgaggtttcggtaaataagggtttt
gggagtgtggagaaggcgagattcggtggtaggtatgggctagcttcgagcgatggcggt
gttgtgaggggtaggaagaaggggaagagtaaggtttgctgggtgtgttcggactgtggg
tattcggatgggcagtggtggggggcgtgtagggagtgcaataaagtgggtacaatgaag
cagttttcagcaggggaaagcggcaatggtggctcgagggtgagcgggttcgaggtgtcg
gataatgtgattcgatcgtggttaccccagcagcccactgaggtgcaacctttgagattg
acggatgtgaaccgggggattaatcagatgaattggaggattcccttgcatgggcccttt
ggatatgaagttgctagggtgcttggtggtggtcttgtaccaggttctttggttttggtt
gggggtgatcctggtgctggcaagagtacactgttgttacagattgctgcaataatagct
gaagggcatgatattggtggatcaagtccagttgtgtatgtatctggtgaagagagtgtc
gaacaaattggaaatagagctgaccgcatgaggattgacacagaagagcttttcttatat
tcaagtactgatattgaggacatattgggacaagttcatcttctttcccccagggctcta
gttgttgattccattcaaactgtatatttaaaaggagtcatcggaagtgcaggaggtctc
tctcaggtgaaagaatgcacatcagccttgctgcgttttgctaagaagactaacatccct
gtgtttttgattggacatgtgacaaaatctggggacatagctgggcctcgtgtcttggag
cacattgttgacgttgttttatatatggaaggggagaagcactcatctcatcgattgctt
cggtctgtgaagaatcggtttgggtccactgatgagcttggagtgtttgaaatgacacaa
ttgggactgcaagttgtttcaaaccccagtgagctgttcttaagtgagcagaactcagat
tctgagattttagctggacttgcggttgctgtaattatggatggatctcgatcttttctc
ctggaaattcaggcattatgtctatctggatcaacagttgcaaggcaagttaatggggtt
ccagcgagcagagctgatatgattattgcggttctcatgaagcaagctggtctaaagctc
caagacaatggcatctttttaaatgttgtaagtggtgtgacactggcagagaccgctggg
gatcttgctgtagcagctgcaatttgcagcagcttcttggagtttcctattcccaatggc
attgcattcattggagaaatcggccttggtggtgaacttcgcacggtacccagaatggag
aaaagggtgaacacagtagcgaaactgggatacaaaaaatgcatagtcccaaaagcagct
gaaaaatctctaccaactcttgaggatatgaacattgagattgtgggctgcaggaatatg
aaagaggttatcaacacagtttttgtctga

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