Vitis riparia (riverbank grape): 117921471
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Entry
117921471 CDS
T07274
Name
(RefSeq) pleiotropic drug resistance protein 1-like
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
117921471
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vri02000
]
117921471
Transporters [BR:
vri02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
117921471
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
AAA_21
AAA_29
ABC_trans_N
AAA_16
AAA_25
AAA
AAA_28
RsgA_GTPase
ABC_ATPase
Adeno_E3_CR2
Motif
Other DBs
NCBI-GeneID:
117921471
NCBI-ProteinID:
XP_034695234
LinkDB
All DBs
Position
9:complement(5215030..5222676)
Genome browser
AA seq
1437 aa
AA seq
DB search
MATADTYRASGSLRRNGSSIWRSSGADVFSRSSRDEDDEEGLKWAALEKLPTYNRLRRGL
LMGSEGEASEIDIHNLGFQEKKNLVERLVKVAEEDNEKFLLKLKNRIDRVGIDVPEIEVR
FEHLTIDAEAFVGSRALPSFHNFIFNKLEGILNAVRILPSKKRKFTILNDVSGIIKPRRL
TLLLGPPSSGKTTLLLALAGKLDPNLKVMGRVTYNGHGMNEFVPQRTAAYISQHDTHIGE
MTVRETLAFSARCQGVGDRYDMLAELSRREKAANIKPDPDLDVFMKAAATEGQKENVVTD
YTLKILGLDICADTMVGDEMIRGISGGQRKRVTTGEMLVGPSKALFMDEISTGLDSSTTY
QIINSLKQTIHILNGTAVISLLQPAPETYNLFDDIILLSDSQIVYQGPREDVLEFFESIG
FKCPARKGVADFLQEVTSRKDQAQYWARKDVPYSFVTVKEFAEAFQSFHFGRKVADELAS
PFDRAKSHPAALTTKKYGVRKKELLDANMSREYLLMKRNSFVYIFKLTQLAVVAVIAMTL
FLRTEMNKNSTEDGSIYTGALFFTVVMIMFNGMAELAMTIAKLPVFYKQRDFLFYPAWAY
ALPTWVLKIPITFVEVAVWVFITYYVIGFDPNVERLFRQYLLLLLVNQMASGLFRFIAAA
GRNMIVASTFGAFAVLMLMALGGFILSHDNVKKWWIWGYWSSPLMYAQNAIVVNEFLGKS
WSKNVTNSTESLGITVLKSRGFFTDAHWYWIGAGALLGFIFVFNFFYTLCLNYLNPFEKP
QAVITEESDNAKTGGKINGSIDNAKTATTERGEQMVEAIAEGNHNKKKGMVLPFQPHSIT
FDDIRYSVDMPEEMKSQGALEDRLELLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGR
KTGGYIEGNISISGYPKKQETFARISGYCEQNDIHSPHVTVHESLLYSAWLRLPSDVNSE
TRKMFIEEVMELVELTPLRDALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSG
LDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQEIYVGPLGRHS
SHLINYFEGIEGVSKIKDGYNPATWMLEVTTGAQEGTLGVDFTEIYKNSDLYRRNKDLIK
ELSQPAPGTKDLYFATQYSQPFFTQFLACLWKQRWSYWRNPPYTAVRFLFTTFIALMFGL
IFWDLGTRRTRQQDLLNAMGSMYAAVLFLGVQNAQSVQPVVVVERTVFYRERAAGMYSAL
PYAFGQALVEIPYVFAQAVVYGVIVYGMIGFEWTAAKFFWYLFFMFCTLLYFTFYGMMAV
AATPNQHIASIIAATFYTLWNLFSGFIVPRNRIPVWWRWYYWICPVAWTLYGLVTSQFGD
IQSTLLENNQTVKQFLDDYFGFKHDFLGVVAAVVVGFVVLFLFIFAYAIKAFNFQKR
NT seq
4314 nt
NT seq
+upstream
nt +downstream
nt
atggccactgctgacacttatagagccagtggtagtttaaggaggaacggttcttcgata
tggaggagctccggtgcggatgttttctcccgatcttcgagggatgaggatgatgaggaa
ggtttgaaatgggccgcactcgagaaacttcccacctacaatcggttgaggagaggtttg
ctgatgggatccgagggtgaggccagtgaaattgatatccataaccttgggtttcaggaa
aagaagaatttagtggagcggttggtaaaagttgccgaagaggacaatgagaagttcttg
ttgaagctcaagaatcgtatcgatagagttggaattgatgttcccgaaattgaagttaga
tttgagcatcttaccatcgatgcagaagcttttgtaggaagcagagctttgccttcattc
cataatttcatttttaataaacttgagggtatcctgaacgctgtgcgtattcttccaagt
aaaaagaggaaattcactattctcaatgatgttagtgggatcatcaaaccacgcagattg
actttgcttttaggtcctccaagttctggaaagaccaccctcttattggcattggctggc
aagcttgatcccaatctaaaggttatgggaagggtgacatacaacggccatggcatgaat
gagtttgtaccccagagaactgcagcctatatcagccaacatgatacccatataggagaa
atgactgtaagggaaaccttggcattctctgcaagatgccagggtgttggagatcgatat
gacatgttagcagagctgtcaagaagagagaaagcagcaaatattaaacctgatcctgat
cttgatgtcttcatgaaggcagcagcaacagaaggtcagaaggaaaatgtagtcactgat
tatacattgaagattttgggactagacatctgtgcagataccatggtaggagatgagatg
ataaggggtatctctggaggacaaaggaagcgtgtcacaacaggtgagatgctggtcgga
ccatcaaaggcactgtttatggatgagatctctactggcttggacagctcaacaacttat
caaatcatcaattctctcaagcaaaccatccatatcctcaatgggactgctgtcatctct
ctcctccagccagcacctgagacttacaatctttttgatgacatcattctcctttctgat
agtcagattgtttatcaaggtcctcgtgaagatgtgcttgaattttttgaatccataggc
ttcaaatgtcctgcaaggaagggtgtggcagacttcctgcaagaagtaacatctagaaaa
gatcaggcccagtattgggcacgtaaagatgtgccttacagctttgtcacagtcaaggaa
tttgctgaggcattccagtcatttcactttggacggaaagtagcagatgagcttgcatca
ccatttgacagggccaaaagccacccagctgctttgacaaccaaaaagtatggtgttaga
aagaaggaactgttggatgccaacatgtcaagagagtacttactgatgaagaggaactca
tttgtttatattttcaaactcacccaacttgcagtagtggcagtgattgcaatgacactc
ttcctaagaactgagatgaacaaaaattcaacagaagatggaagcatttacacgggtgcc
ttgttcttcactgttgtcatgatcatgtttaatggaatggcagaacttgccatgacaatt
gcaaaacttcctgtcttttacaagcaaagagactttctcttctatcctgcatgggcatat
gctcttcccacatgggtgctcaagatccccatcacatttgttgaagttgctgtttgggtg
ttcatcacttactatgtcattggatttgatccaaatgttgaaaggttgtttagacagtat
cttctcctcttgcttgttaatcagatggcatctggattatttcgatttatagcagcagcc
ggtagaaacatgattgttgcaagcacatttggggcatttgctgtacttatgctcatggca
ttgggtggttttatcctgtcacatgataatgtcaagaaatggtggatttggggttactgg
tcgtcccctctgatgtatgcacagaatgcaatagtggtaaatgaattccttgggaagagt
tggagcaaaaatgttaccaattcaacagaatcccttggaatcacagtattgaagtctcgt
gggttcttcacagacgcacactggtactggataggagctggggcactgcttggattcata
tttgttttcaacttcttttacactctctgcctcaattacttaaatccatttgagaagcct
caagctgttataacagaagagtctgacaatgccaaaactggaggaaagataaatggttct
attgacaatgccaaaactgcaaccacagagaggggagagcaaatggtagaagccattgct
gagggtaaccataataagaagaaaggaatggttcttccattccaaccacattctatcact
tttgatgatattagatactcagttgacatgccagaggaaatgaaaagtcagggtgccctt
gaagacagactggagcttctgaagggggtgagtggtgctttcaggcctggtgttcttaca
gctctcatgggtgttagtggtgctggtaaaaccactctcatggatgtactggctggtcgg
aaaactggtggatatattgagggtaacatttctatttctggctacccaaagaagcaagag
acttttgctcgaatttctggatactgtgagcagaatgacatccactctcctcatgttact
gtccatgagtccttgctctactcagcttggctgcggttgccttctgatgtgaattctgaa
accagaaagatgttcattgaggaagtcatggagcttgtggaactgaccccattgagggat
gcactggttgggttgccaggtgtaaatggcctctcaacggagcagcgcaagaggctgact
attgcagttgagcttgtggcaaatccctcaataatattcatggatgagccaacttcaggg
ctagatgcaagagctgctgcaattgttatgagaacagtcagaaacactgtggacacagga
agaacagttgtgtgcaccatccatcagccaagtattgacatatttgaggccttcgatgag
ttgctcctgatgaagcgtggagggcaagagatatatgtgggaccactgggtagacattct
tcccatctgataaattatttcgagggaattgaaggagtcagtaaaatcaaagatggttat
aaccctgcaacctggatgctggaagttaccaccggagcacaagaaggaactttgggggtc
gatttcactgaaatatacaagaattcagacctatacaggagaaacaaagatttaattaaa
gaactgagccaacctgcccctggtacaaaagacctctatttcgctactcaatactcccaa
cccttcttcacccaatttttggcatgcttatggaaacaacgttggtcatactggcggaac
ccaccatacacggcagtgagatttctcttcacaactttcatagccttgatgtttgggtta
attttctgggatctgggcaccagaaggacaaggcaacaagatctgttaaatgcaatgggt
tctatgtatgctgctgttctctttcttggggttcagaacgcccaatcggtccagccagtc
gttgtagttgaacgaacagtcttttacagagaaagagctgctggaatgtattcagccctg
ccatatgcctttggacaggctcttgttgagattccatatgtctttgcacaagctgtggtg
tatggtgttatagtttatggaatgattggatttgaatggacagccgctaaattcttctgg
tatctgttcttcatgttctgcactttgttgtacttcaccttctatggcatgatggctgtg
gctgccacgccaaatcaacatattgcttccatcattgcggcaacattttatacattatgg
aacctcttttcaggtttcatagtcccacgaaacagaattccggtgtggtggagatggtac
tattggatatgtccagttgcatggactttgtatggattggttacatcacagtttggagat
atacagagcacactacttgagaataatcaaacggtgaaacaattcttggatgattatttt
ggattcaaacatgatttcctgggagtggttgcagctgtggttgttgggtttgtggtgctt
ttcttattcatctttgcctatgccattaaggcatttaacttccaaaagcgataa
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integrated database retrieval system
