Vitis riparia (riverbank grape): 117921473
Help
Entry
117921473 CDS
T07274
Name
(RefSeq) pleiotropic drug resistance protein 1-like
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
117921473
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vri02000
]
117921473
Transporters [BR:
vri02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
117921473
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
AAA_21
AAA_29
AAA_16
ABC_trans_N
AAA
AAA_25
AAA_28
RsgA_GTPase
nSTAND3
ABC_ATPase
RuvB_N
Motif
Other DBs
NCBI-GeneID:
117921473
NCBI-ProteinID:
XP_034695236
LinkDB
All DBs
Position
9:complement(5153037..5160516)
Genome browser
AA seq
1424 aa
AA seq
DB search
MATADIYRASGSFRRNGSSIWRNSGADVFSQSSRDEDDEEALKWAALEKLPTYNRLRKGL
LMGSEGEASEIDVHNLGFQEKKNLVERLVKIAEEDNEKFLLKLKNRIDRVGVDVPEIEVR
FEHLTIDAEAFVGSRALPSFHNFIFNKLEGILNAVHILPSKKKKCTILNDVSGIIKPRRM
TLLLGPPSSGKTTLLLALAGKLDPNLKVTGRVTYNGHSMNEFVPQRTAAYISQHDTHIGE
MTVRETLAFSARCQGVGDRYDMLAELSRREKAANIKPDPDLDVFMKAAATEGQKENVVTD
YTLKILGLDICADTMVGDEMIRGISGGQRKRVTTGEMLVGPSKALFMDEISTGLDSSTTY
QIVNSLKQTIHILNGTAVISLLQPAPETYNLFDDIILLSDSQIVYQGPREDVLEFFESMG
FKCPARKGVADFLQEVTSRKDQAQYWARKEEPYCFVTVKEFAEAFQSFHIGRKVADELAS
PFDKAKSHPAALTTKKYGVRKKVLLDANMSREYLLMKRNSFVYIFKLTQLAVMAVIAMTL
FLRTEMHKNSTDDGSIYTGALFFTVVMIMFNGMAELAMAIAKLPVFYKQRDLLFYPAWAY
ALPSWVLKIPITFVEVGVWVFITYYVIGFDPNVERLFRQYLLLLLVNQMASGLFRFIAAA
GRNMIVANTFGAFALLMLLASGGFILSHDNVKKWWIWGYWSSPLMYAQNAIVVNEFLGKS
WSKNVTDSTESLGVTVLKSRGFSTDAHWYWIGAGALLGFIFVFNFFYTLCLNYLNPFEKH
QAVITEESDNAKTATTERGEEMVEAIAEPKHNKKKGMVLPFQPHSITFDDIRYSVDMPEE
MKSQGALEDRLELLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGKITIS
GYPKKQETFARISGYCEQNDIHSPHVTVHESLLYSAWLRLPSDVNSETRKMFIEEVMELV
ELTPLRDALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTV
RNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQEIYVGPLGRDSSHLINYFEGIEGV
SKIKDGYNPATWMLEVTTSAQEVILRVDFTEIYKNSDLYRRNKDLIKELSQPAPGTKDLY
FATQYSQPFFTQFLACLWKQRWSYWRNPPYTAVRFLFTTFIALMFGTMFWDLGTKRTRQQ
DLFNAMGSMYAAVLFLGIQNAQSVQPVVVVERTVFYRERAAGMYSALPYAFGQALVEIPY
VFAQAVVYGVIVYVMIGFEWTAAKFFWYLFFMFFTLLYFTFYGMMAVAATPNQHIASIVA
AAFYGIWNLFSGFIVPRNRIPVWWRWYYWICPVAWTLYGLVTSQFGDIQDTLLENNQTVK
QFLDDYFGFKHDFLGVVAPVVVGFVVLFLFIFAYAIKAFNFQRR
NT seq
4275 nt
NT seq
+upstream
nt +downstream
nt
atggccactgctgacatttatagagccagtggtagttttcggaggaacggttcttcgata
tggaggaactcgggtgcggatgttttctcacaatcttcgagggatgaggatgatgaggaa
gctttgaaatgggccgcactcgagaaacttcccacctacaatcggttgaggaaaggtttg
ctgatgggatcagagggtgaggccagtgaaattgatgtacataaccttgggtttcaggaa
aagaagaatttagtggagcggttggtaaaaattgccgaagaggacaatgagaaattcttg
ttgaagcttaagaatcgtatcgatagagttggagttgatgttcccgaaattgaagttaga
tttgagcatcttaccatcgatgcagaagcttttgtcggaagcagagctttgccttcattc
cataatttcatttttaataaacttgagggcatcctgaacgctgtccacattcttccaagt
aaaaagaagaaatgcactattctcaatgatgttagtggaatcatcaaacctcgcagaatg
acgttgcttttaggtcctccaagttctggaaagaccaccctcttattggcattggctgga
aagcttgatcccaatctaaaggttacgggaagggtgacatacaacggtcacagcatgaat
gagtttgtaccccagagaactgcagcttatatcagccaacatgatacccatataggagaa
atgactgtaagggaaaccttggcattctctgcaagatgccagggtgttggagatcgatat
gacatgttagcagagctgtcaagaagagagaaagcagcaaatattaagcctgatcctgat
cttgatgtcttcatgaaggcagcagcaacagaaggtcagaaggaaaatgttgtcactgat
tatacattgaagattctgggactagacatctgtgcagataccatggtaggagatgagatg
ataaggggtatctctggaggacaaaggaagcgtgtcacaacaggtgagatgctggtagga
ccatcaaaggcactgttcatggatgagatctctactggcttggacagctcaacaacttat
caaattgtcaattctctcaagcaaaccatccacattctcaatgggactgctgtcatctct
ctcctccagccagcacctgagacttacaatctttttgatgacatcattctcctctctgat
agtcagattgtttatcagggtcctcgtgaagatgtgcttgaattttttgaatccatgggc
ttcaaatgtcctgcaaggaagggtgtggcagactttctgcaagaagtaacatctaggaaa
gatcaggcccagtattgggcacgtaaagaagagccttactgttttgtcacggtcaaggaa
tttgctgaggcattccagtcatttcacattggacggaaagtagcagatgagctggcatca
ccatttgacaaggccaaaagccacccagctgctttgacaacaaagaagtatggtgttaga
aagaaggtactgttggatgccaacatgtcaagagagtacttgctgatgaagaggaactca
tttgtctatattttcaagcttacccaacttgcagttatggcagtgattgcaatgacactc
ttcctaagaactgagatgcacaaaaattcaacagatgacggaagcatttacaccggtgct
ttgttcttcactgttgtcatgatcatgtttaatggaatggcagaacttgccatggcaatt
gcaaaacttcctgtcttttacaagcaaagagacctactcttctatcctgcatgggcatat
gctcttccatcatgggtgctcaagatccccatcacatttgttgaagttggtgtttgggtg
ttcatcacttattatgtcattggatttgatccaaatgtggaaaggttgtttagacagtat
cttctcctcttgcttgttaatcagatggcatctggattatttcgatttatagcagcagct
ggtagaaacatgattgttgcaaacacatttggggcttttgctttacttatgctcttggca
tcgggtggttttatcctgtcacatgataatgtcaagaaatggtggatttggggttactgg
tcttcccctctgatgtatgcacagaatgcaatagtggtaaatgaattccttgggaagagt
tggagcaaaaatgttaccgattcaacagaatcccttggagttacagtattgaagtctcgt
gggttctccacagacgcacactggtactggataggagctggggcactgcttggattcata
tttgtgttcaacttcttttacactctgtgcctcaattacctaaatccatttgagaagcat
caagctgttataacagaagagtctgacaatgccaaaactgcaaccacagagaggggagag
gaaatggtagaagccattgctgagcctaaacataataagaagaaaggaatggttcttcca
ttccaaccacattctatcacctttgatgatattagatactccgttgacatgccagaggaa
atgaaaagtcagggtgcccttgaagacagactggagcttctgaagggggtgagtggtgct
ttcaggcctggtgttcttacagctctgatgggtgttagcggtgctggtaaaaccactctc
atggatgtactggctggtcggaaaactggtggatatattgagggtaagatcaccatttct
ggctacccaaagaagcaagagacttttgctcgaatttctggatactgtgagcagaatgat
atccactctcctcatgttactgtccatgagtccttgctctactcagcttggctgcggttg
ccttctgatgtgaattctgaaaccagaaagatgttcattgaggaagtcatggagcttgtg
gaactgaccccattgagggatgcactggttgggttgccaggtgtaaacggcctctcaacc
gagcagcgcaagaggctgacaattgcagttgagcttgtggcaaatccctcgattatattc
atggatgagccaacttcagggctagatgcaagagctgctgcaattgttatgagaacagtc
aggaacactgtggacacaggaaggacagttgtgtgcaccatccatcagccaagtattgac
atatttgaagcctttgatgagttgctcctgatgaagcgtggagggcaagagatatatgtg
ggaccactgggtagagattcttcccatctaataaattattttgagggaattgaaggagtc
agtaaaatcaaagatggttataaccctgcaacctggatgctggaagttaccacctcggca
caagaagtaattttaagggttgatttcactgaaatatacaagaattcagacctgtacagg
agaaacaaagatttaattaaagaactgagccaacctgcccctggtacaaaagacctctat
ttcgctactcaatactcccaacccttcttcacccaatttttggcatgcttatggaaacaa
cgttggtcatactggcggaacccaccatacacggcagtgagatttctcttcacaactttc
atagccttgatgtttgggacaatgttctgggatctgggcaccaaaaggacaaggcaacaa
gatctgtttaatgcaatgggttctatgtatgctgctgttctcttccttgggattcagaat
gcccaatcggtccagccagttgttgtagttgaacgaacagtcttttacagagaaagagct
gctggaatgtattcagccctgccatatgcctttggacaggctctagttgagattccatat
gtctttgcacaggctgtggtgtatggtgttatagtttatgtaatgattggatttgaatgg
acagccgctaaattcttctggtatctgttcttcatgttcttcactttgttgtacttcacc
ttctatggcatgatggctgtggctgccacgccaaatcaacatattgcgtccatcgttgcc
gcagcattttatggaatatggaacctcttttcaggtttcatagttccacgaaacagaatt
ccggtgtggtggagatggtactattggatatgcccagttgcatggactttgtatggattg
gttacatcacagtttggagatatacaggacacactacttgagaataatcaaacggtgaaa
caattcttggatgattattttggattcaaacatgatttcctgggagtggttgcacctgtg
gttgttgggtttgtggtgctgttcttattcatctttgcctatgccattaaggcatttaac
ttccaaaggcgataa
DBGET
integrated database retrieval system
