Vitis riparia (riverbank grape): 117921508
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Entry
117921508 CDS
T07274
Name
(RefSeq) nuclear poly(A) polymerase 4-like isoform X1
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117921508
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vri03019
]
117921508
Enzymes [BR:
vri01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
117921508
Messenger RNA biogenesis [BR:
vri03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
117921508
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
Nrap_D2
Motif
Other DBs
NCBI-GeneID:
117921508
NCBI-ProteinID:
XP_034695285
LinkDB
All DBs
Position
9:2865033..2873333
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AA seq
756 aa
AA seq
DB search
MVSSKGLGDSPPRQSVKQYGVTKPISVAGPTEVDIQRSLELEKFLVDAGLYESKEEAIKR
AEVLDRLGQIVKDWVKQLTRLRGYTDQMVEDANAVLFTFGSYRLGVHGPGTDIDTLCIGP
SYVSREEDFFFILHNILADMEEVTELQPVPDAHVPVMKFKFDGISIDLLYASISLLVVPE
DLDISDLSVLYNIDEPTVRSLNGCRVADQILKLVPNVEHFRATLRCLKFWAKRRGVYSNV
TGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFSVW
DPRKNPRDRTHHMPIITPAYPCMNSSYNVSISTLRVMMEQFQYGNKICEEIELSKAQWGA
LFEPYLFFESYKNYLQVDIVAVDIDDLRAWKGWVESRLRQLTLMIERDTFGKLQCHPYPH
EYVDTSKQCSHCAFFMGLQRKQGEIIQEGQQFDIRGTVDEFRHSINMYMFWKPGMEIYVS
HVRRKQIPSYVFPEGYKRSRPQRPVNQQQGDEACRTGSSEKHMKRKKDPEEVDVEQDKAA
KRLTISPQRQDSVSPEIISHRFSSSSQECSASGSAKAKEIVEGDRKCQVGMGKLEDLVST
NVENIEMGAIGRGMRWMKADEKGNIEPDKSDKPIPCTGNAEAGSVSNSSAVTSITSEVSS
SGDVGFESVGGSSDGNTGSVEGSNILGISQGDSCEADSELLLENGCLNAKEGFQDGLHEE
LEPNAALGIVLKSRGGVDSEPVPKSVLSRLSLTSTA
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atggtgagttcaaaggggttgggggattcgccgcctcggcaatcggtgaagcagtatggc
gtgacgaagccgatatctgttgcggggccgactgaggtggatattcagaggagcttggag
ttggagaagtttttggtggatgccgggctttatgagagcaaggaagaagcaattaagaga
gcagaggttcttgatcggcttgggcagattgtaaaagattgggtgaagcagctgacacgc
ttgagagggtacacagaccagatggtggaggatgcaaatgctgtgttatttacttttggt
tcctatcggcttggggtgcatggtcctgggactgacatagacactttatgtattgggcca
tcatatgtgagtcgggaggaggatttcttctttatattgcataacatcctggcagacatg
gaagaagttacagaactacagccagttccagatgcacacgttccagtgatgaaatttaag
tttgatggaatatcaattgatcttctttatgcgagtatctctcttttggttgtgccagaa
gacttggacatctctgatttgtctgtactatacaatattgatgagccgactgttcgaagt
cttaatggctgcagagttgcagatcaaattcttaagctcgttccaaatgttgagcatttt
cgcgcaacactgcgatgtttaaaattttgggctaaaaggcgtggtgtttattccaatgtt
actggatttcttggtggtgtgaactgggctcttcttgtggctcgggtgtgccagctttat
cctaatgcggtacctagtatgctggtttccagattcttcagggtttacactcagtggcgc
tggccgaaccccgtgatgctatgtgcaatagaagaagatgaacttggtttctctgtctgg
gatccccgcaaaaatcctcgagatcgaactcatcacatgccaatcataacacctgcttat
ccttgcatgaactcgagttataatgtgtcaataagtacacttcgggttatgatggagcaa
tttcaatatgggaataagatctgtgaggagatagagctgagtaaagctcagtggggtgct
ctgtttgagccttacctgttctttgaaagctacaagaactatctgcaagttgacatagtt
gcagttgacattgatgacttgcgtgcttggaagggttgggtggaatccaggctgaggcag
ttgactctgatgatagagagggacacctttggaaagttacagtgccatccttatccacat
gagtacgttgatacatccaaacagtgttcccattgtgccttttttatgggtttgcaaaga
aaacagggggaaataatccaggaaggtcagcagtttgatatacggggaacagttgatgaa
ttcagacactctattaatatgtacatgttttggaaaccgggaatggagatctatgtttca
catgttcgtagaaagcagattccatcttatgtattcccagaaggttacaaaagatcccgc
ccacaaaggcctgttaaccagcagcagggtgatgaagcatgtaggactggatccagtgag
aaacatatgaagaggaagaaagatcctgaggaagtagatgtggagcaagataaagcagca
aaacggctaaccattagtccacagaggcaggactcggtttctcctgaaattattagtcac
aggttcagcagttcatcacaggaatgttcagcgtcaggttctgcaaaagcaaaagagatt
gttgaaggggacagaaaatgccaggtgggtatgggcaaactggaagatttggtgtcaact
aatgtagagaatatcgagatgggagccattgggagagggatgaggtggatgaaggctgat
gagaagggcaatatagagccagataaatcagacaagccgataccttgcacaggaaatgcc
gaggctggaagtgtctctaattctagtgctgtcactagcattacaagtgaggtcagttct
tctggggatgttggatttgaatcagtaggaggcagtagtgatgggaacactggcagtgtt
gaagggagcaatatccttggtatttcacagggtgattcatgtgaggcagattctgaattg
cttctggagaatggttgcctgaatgccaaggaaggatttcaagatggattacatgaagag
ttagagccaaatgctgcccttgggattgtgttgaaatctagaggtggagttgactcggaa
cctgtgccaaaatcagtgttgagcaggttgagtctaacatcaacagcgtga
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