Vitis riparia (riverbank grape): 117921510
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Entry
117921510 CDS
T07274
Name
(RefSeq) chaperonin 60 subunit alpha 2, chloroplastic
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117921510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vri03019
]
117921510
03110 Chaperones and folding catalysts [BR:
vri03110
]
117921510
03029 Mitochondrial biogenesis [BR:
vri03029
]
117921510
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vri04147
]
117921510
Enzymes [BR:
vri01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
117921510
Messenger RNA biogenesis [BR:
vri03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
117921510
Chaperones and folding catalysts [BR:
vri03110
]
Heat shock proteins
HSP60 / Chaperonin
117921510
Mitochondrial biogenesis [BR:
vri03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
117921510
Exosome [BR:
vri04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117921510
Exosomal proteins of other body fluids (saliva and urine)
117921510
Exosomal proteins of breast cancer cells
117921510
Exosomal proteins of colorectal cancer cells
117921510
Exosomal proteins of bladder cancer cells
117921510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
TAL_FSA
Motif
Other DBs
NCBI-GeneID:
117921510
NCBI-ProteinID:
XP_034695294
LinkDB
All DBs
Position
1:1532905..1556222
Genome browser
AA seq
583 aa
AA seq
DB search
MSLCFSSSLSLPQPSFFSNLNGEQRVCGLWRNPRIFRSLRVRAGPKRISFDRECREGLQA
GIDKLADAVSLTLGPKGRNVILSEAGTLKVINDGVTIARAIELSDAIENAGATLMQEVAS
KTNDVAGDGTTTAIILAREMIKSGLLVVAFGANPIGLKKGMDKTVKELVKVLKKKSFPVK
GRDDIRAVASISAGNDDFVGNLIAEAIDKIGPDGVISIESSSSSETSVIIEEGMKIDKGY
MSPHFITNQDKSIVEFENAKVLVTDQKISTIKGIVPLLEKTTQLSVPLLIIAEDISSQVL
ETLVVNKMQGIINVAVVKCPGFGEGKKALLQDIALLTGADFLSGDLGLTLDSATSDQLGI
ARKVTITSNSTTFVADPSTKPEIQARILQIKKDLAETDSSYLSRKLSERIAKLSGGVAII
KVGAHTETELEDRKLRIEDAKNATFAAMDEGIVPGGGATYIHLEEQIPIIKHSMEDPDEQ
IGADIVAKALAAPAKAIATNAGVDGAVVIEKIRTCDWRTGYDAMTGRYQDLLNAGVVDPC
RVSRCALQNAVSVAGIVLTTQAVLVEKTKPPKSAVPRLPGITP
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgtctctttgcttttcttcaagcctctctcttccgcagccgtctttcttttctaatctg
aacggggagcaaagggtttgtgggttatggagaaatccgcggatttttaggagtttgcgg
gtcagagctggccccaagaggatatcttttgacagagaatgtagggagggcttacaagct
gggatagataagcttgctgatgctgtttctcttaccttaggacccaaaggacgtaatgtg
attctttctgaggccggaacattaaaagtgatcaatgatggggtgacaattgctcgggct
atagagctttcggatgcaattgaaaacgcaggagcaacgcttatgcaagaggttgcaagt
aagacaaatgatgtggcaggtgatggtactacgactgctatcattttggctcgggaaatg
atcaagtctggtttgttggtggtcgcttttggagctaacccaattggtttgaagaaagga
atggataagactgtgaaagaattggtcaaggttttgaagaagaaaagctttcctgtaaaa
gggagggatgatataagagctgtggcctcaatttctgctggaaatgatgactttgttggg
aatttaattgctgaagctatagataaaattggccctgatggagtaatctccattgaatca
tcctcatcgtctgaaacctctgttataattgaagaaggaatgaagatcgacaaaggttat
atgtcaccccactttatcacaaaccaggacaaatctattgtggagtttgagaatgctaaa
gttcttgtaactgatcaaaagatttcaaccatcaaaggaatagtccctttactggaaaag
actacccaactgagtgtcccactgctaatcattgctgaggacatctcaagtcaagtactt
gaaacactggttgtgaacaaaatgcaaggaataattaatgttgctgtggtcaaatgtcca
ggatttggagaaggaaagaaagctttattgcaagatatagcccttttgacaggtgctgat
ttcctctctggagatttgggactgactcttgacagtgcaacgtcagatcagcttggcatt
gcaagaaaagtaaccataacaagcaattcaacaacctttgttgctgatccttcaactaaa
cctgaaatacaggcaagaattttgcagataaagaaagatctcgctgaaactgatagttcg
tatctttcaaggaagctctctgaaaggattgctaaactctctggtggtgtggccataatc
aaggtaggagcacatacagagacggaactcgaagatcggaaactcagaattgaggatgca
aagaatgcaacgtttgctgccatggatgaaggtatagtacctggtggtggggctacctat
attcatctggaagaacagatacccatcataaagcactccatggaagatccagacgagcag
attggtgctgacattgtggcaaaggcacttgctgcaccagccaaagcaattgcaactaat
gcaggagttgatggagctgttgtcatagagaagatccggacttgtgactggagaacaggg
tatgatgcaatgacgggtagataccaagatcttctcaatgctggagtggttgatccctgt
cgggtctcaaggtgtgcccttcaaaatgcagtatctgttgctggcattgttctaacaacc
caagctgtattggtggagaaaacaaagccgcccaagtcagcagttcctcgtctccctgga
ataactccttaa
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