Vitis riparia (riverbank grape): 117921535
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Entry
117921535 CDS
T07274
Name
(RefSeq) pyridoxal 5'-phosphate synthase-like subunit PDX1.2
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri00750
Vitamin B6 metabolism
vri01100
Metabolic pathways
vri01240
Biosynthesis of cofactors
Module
vri_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
117921535
Enzymes [BR:
vri01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
117921535
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Motif
Pfam:
SOR_SNZ
ThiG
Dus
His_biosynth
NMO
FMN_dh
IGPS
ThiI
Ribosomal_S5_C
Motif
Other DBs
NCBI-GeneID:
117921535
NCBI-ProteinID:
XP_034695332
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Position
9:4407066..4408419
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AA seq
293 aa
AA seq
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MAEEGVVTVYGSGAIADPAKTSFSIKAGMAQMLRGGAIFEVMNLDQAKIAEEAGACAVIV
SESISKGISRLIDPAVIKEIKRRVSIPVIARARVGHFVEAQILEAVGVDYIDESELSVAD
EDNFINKHNFRTPFVCGCRDLGEALRRVREGAVMIRIQGDLSGSGNVAETVRNVRKVMGD
IRVLTNMDDDEVFAFSKKIGAAYDVVAQTKEMARLPVLHFAAGGIVTPADAALMMQLGCD
GVLVGSKIFGSADPYKRVRAIVQAVRHYNDAQVLAESCSELDVAVADLRIVEE
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagaaggcgtggttacggtctacggaagcggcgccatcgccgaccctgccaag
acctccttctccatcaaggctggaatggcccagatgctccgcggcggtgccattttcgaa
gtcatgaatctggatcaagccaagatcgctgaggaagccggagcttgtgccgtcatcgta
tcggaatcgatttccaagggcatatcgaggctgattgatcccgctgtgatcaaggaaatc
aagcggagagtctcaattccggtgattgcgagagcgcgggttgggcatttcgtggaagcg
cagatcttggaggccgtcggcgtggactatattgatgagagtgaattgtccgttgctgat
gaagataacttcattaataagcataattttcgaactccgtttgtctgcggctgtcgggat
cttggtgaagcgcttaggagggtgagggaaggggctgtgatgatccggattcagggggat
ttgtctgggtccgggaacgttgctgagacggttcggaatgtgaggaaagtgatgggggat
ataagagtgctaacgaacatggatgatgacgaagtcttcgcattttcgaagaagataggt
gcagcttatgatgttgtggcccagaccaaggaaatggctaggcttccggttctgcatttt
gcagccggaggcatcgtcacccctgctgatgccgcgctgatgatgcagttggggtgcgat
ggagtgcttgtgggttccaaaatttttggctctgcggatccttataagcgagttcgggca
attgttcaggctgttaggcactacaacgatgcgcaggtgttggcagagagttgctctgaa
ttggatgtggcagtggcggacctcagaatcgttgaggagtag
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