Vitis riparia (riverbank grape): 117921627
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Entry
117921627 CDS
T07274
Name
(RefSeq) LOW QUALITY PROTEIN: myosin-17-like
KO
K10357
myosin V
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
117921627
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vri03019
]
117921627
04131 Membrane trafficking [BR:
vri04131
]
117921627
03029 Mitochondrial biogenesis [BR:
vri03029
]
117921627
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
vri04812
]
117921627
Messenger RNA biogenesis [BR:
vri03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
117921627
mRNA cycle factors
P-body specific factors
117921627
Membrane trafficking [BR:
vri04131
]
Others
Actin-binding proteins
Myosins
117921627
Mitochondrial biogenesis [BR:
vri03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
117921627
Cytoskeleton proteins [BR:
vri04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
117921627
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
CCDC113_CCDC96_CC
nSTAND3
TSC22
AAA_22
AAA_16
TRPM_tetra
FlaC_arch
AAA_19
Flp1_like
ABC_tran
Motif
Other DBs
NCBI-GeneID:
117921627
NCBI-ProteinID:
XP_034695467
LinkDB
All DBs
Position
9:1612114..1630125
Genome browser
AA seq
1530 aa
AA seq
DB search
MAAPVNIVVGSHVWVEDPVEAWIDGEVSRINGLEVHVHTTKGKTVVANISKVFPKDTEAP
PGGVDDMTKLSYLHEPGVLQNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQY
KGAGFGELSPHVFAVADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAHLGGRS
GVEGRTVEQQVLESNPVLEAFXNAKTVRNNNSSRFGKFVEIQFDKSGRISGAAVRTYLLE
RSRVCQISTPERNYHCFYLLCAAPPEEIERYKLGNPRTFHYLNQSNCYELDGVNDGHEYL
ATRRAMDIVGISEQEQEAIFRVVAAILHLGNINFAKGKEIDSSVIKDEQSRFHLNMTAEL
LKCDAQSLEDALIKRVMVTPEEIITRTLDPVNAIGSRDALAKTIYSRLFDWLVDKINNSI
GQDPNSKSIIGVLDIYGFESFKCNSFEQFCINYTNEKLQQHFNQHVFKMEQEEYTKEEIN
WSYIEFVDNQDVLDLIEKKPGGIISLLDEACMFPKSTHETFAQKLYQTFKNNKRFIKPKL
SRTDFTISHYAGEVNYQANLFLDKNKDYVVAEHQALLTASNCPFVVSLFPAQSEETSKSS
KFSSIGSRFKLQLQSLMETLSATEPHYIRCVKPNNVLKPAIFENANIIQQLRCGGVLEAI
RISCAGYPTRRTFYEFLHRFGVLAPEVLEGNYDDKTACIMILDKKGLKGYQVGKTKVFLR
AGQMAELDARRAEVLGNAARTIQRQIRTYIARKEFISLRKAAIQMQSYWRGRMACKLYEQ
LRREAAALKIQKNFRRYIARKSYLTVRSSAITLQTGLRAMTARNEFRFRKQTKAAIIIQA
HWRCHQAYSYYKSLQKAIIVTQCSWRCRVARRELRKLKMAARETGALKEAKDKLEKRVEE
LTWRLQLEKRLRVDLEEAKAQETAKLQEMLHAMQLQIEEANVMVIREREAARKAIEEAPP
VIKETPVIVQDTEKVDSLTAEVERLKASLLSQTQAAEEAKQACAAAQAQNEELTTKLGDA
EKKVDQLQDSVQRLEEKLSNLESENQVLRQQALAISPTAKALSARPKTPILQRTPENGNV
LNGEAKKQLDSSLALSSPREPESEEKPQKSLNEKQQENQDLLIKCISQDLGFSGGRPIAA
CLIYKSLLQWRSFEVERTSVFDRIIQTIGAAIEVQDNNDVLSYWLCNSSTLLLLLQRTLK
ASGAASLTPQRRRSTSASLFGRMSQGLRASPQSAGFSFLNGRVLGGLDDLRQVEAKYPAL
LFKQQLTAFLEKIYGMIRDNLKKEISPLLGLCIQAPRTSRASLVKGRSQANAVAQQALIA
HWQSIVKSLNYYLKIMKANHVPPFLVRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEFV
KTGLAELENWCHEATEEYAGSAWDELRHIRQAVGFLVIHQKPKKTLKEITNDLCPVLSIQ
QLYRISTMYWDDKYGTHSVSSDVISSMRVMMTEDSNNAVSSSFLLDDDSSIPFTVDDISK
TMQQIEVSDIDPPPLIRENSGFSFLLPRAE
NT seq
4593 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaccggttaatatagttgtaggttctcatgtatgggttgaagatccagtggag
gcatggattgatggtgaagtttctaggatcaatggtcttgaggttcatgttcataccaca
aaaggaaaaacggttgttgcgaatatttctaaggtgtttccaaaggatactgaagctcca
cctggaggtgtagatgacatgacaaagctttcatatttgcatgaacctggggttctgcaa
aacttggccgctagatatgaacttaatgagatttatacgtatactggaaacatcttaatt
gcaataaatccttttcaaagattgcctcatctgtatgacacccacatgatggaacaatat
aagggagcaggttttggggagctcagtcctcatgtgtttgctgttgcagatgttgcatac
agggcaatgattaatgaaggaaagagcaactcgattttggtcagtggagaaagtggtgct
ggtaaaactgaaacaacaaagatgctcatgagatatctagcccacttgggagggagatct
ggtgtagagggaagaacagttgaacagcaggtcttggagtccaatccagttctggaagca
tttngcaatgccaaaactgttagaaacaacaactcgagtcgttttggtaaatttgttgaa
atccaatttgacaagagtggaaggatatctggggcagctgtcagaacttatcttcttgaa
aggtctcgagtatgccagatttcaactcctgagaggaactaccattgcttttatcttctt
tgtgcagcaccacctgaggaaattgagagatataagttggggaatccaagaacctttcat
tatctaaatcagtcaaattgttatgaactggatggtgtaaatgatggtcatgaatatctg
gccaccagaagggctatggatatagttggaattagtgaacaagaacaggaggcaattttc
agggttgtcgctgcaattcttcatcttggcaatattaactttgcaaaaggaaaggagata
gattcctcagtcatcaaggatgaacagtcgagattccatcttaacatgacggctgaactt
ctcaagtgtgatgcccagagcttggaagatgcactaattaaacgtgtaatggtgacacca
gaagaaattattacaagaactcttgatcctgttaatgccattggtagcagggacgcatta
gctaaaactatatattctcgcttgtttgattggcttgtggataaaattaacaactcaatt
gggcaggacccaaactcgaagtcaataattggagttcttgatatctatggttttgaaagt
tttaagtgtaatagttttgagcagttctgcatcaactatacaaatgagaaactacaacag
catttcaatcagcatgtcttcaaaatggagcaagaagagtatacaaaagaagagataaac
tggagctatattgagtttgttgataatcaagatgttttggatctgattgagaagaaacct
ggaggaattatttcacttctagatgaagcctgcatgtttcctaagtctacacatgagacg
tttgcacagaagttgtaccagacttttaaaaataataaacgttttatcaaaccaaagctt
tcacgtactgattttactattagccattatgcaggggaggtaaattaccaagccaatctg
tttctggacaaaaacaaagattatgtggtggcagaacatcaagctttgcttactgcatca
aattgcccctttgtggtcagtttatttcctgcacaatcagaggaaacatcaaagtcatcc
aaattttcttccattggatcacgttttaagctacaactgcaatctttgatggagactttg
agtgctactgaacctcactacatcagatgcgtgaagccaaataatgtcttgaagcctgcc
atttttgagaatgccaatattatccaacaattacgctgtggtggtgttcttgaggcaatc
aggatcagctgtgctggatatcctaccaggcggacattctatgagtttcttcaccgtttt
ggtgttcttgctccagaagttcttgagggaaactatgatgacaagactgcatgcataatg
attcttgataaaaagggtttgaaaggataccaggtgggcaagacaaaggtttttctgaga
gcaggtcagatggccgagttagatgccagaagagctgaggttcttgggaatgcagctaga
acaattcaacgacaaattcgtacttacattgcacgcaaggagttcatctcattacgcaaa
gctgctattcagatgcaatcctattggcgaggtagaatggcctgcaaactgtatgagcaa
ttgaggcgagaagctgcagctctgaagatccagaagaactttagacgatatattgccagg
aaatcatacttaacagtacgatcatctgcaatcacattgcaaacaggcttgagggcaatg
actgcacgcaatgaattcagattccggaagcaaactaaagctgccatcatcatccaggca
cattggcgttgccaccaagcttactcttattataagagtcttcagaaggcaataattgta
actcagtgtagttggagatgcagagttgccagaagagagcttagaaagctcaaaatggct
gcaagagaaacaggggcccttaaagaagcaaaggacaagctagaaaagcgggtggaggaa
cttacatggagattgcagttggagaagcgattaagggttgatcttgaggaggcaaaagcc
caggaaactgctaaactgcaagaaatgttgcacgcaatgcaattgcaaatagaagaagct
aatgtcatggttatcagagaacgagaggcagctcggaaagcaattgaagaagcacctcct
gtcattaaggagaccccagttatagtccaagatacagagaaggtggactcgttgacagct
gaagttgaaaggctgaaggcttctttactatcacaaacacaagcagcagaagaggccaag
caagcttgtgctgctgctcaggcccaaaatgaggaactaaccacaaagcttggtgatgca
gagaagaaagtggatcaactccaagattcagtgcagaggcttgaagagaagctttctaat
ttagaatcagagaatcaagtacttcgtcaacaggcactggccatatcaccaactgctaaa
gctttatctgcacgaccaaaaacaccgattcttcagagaactcctgagaatggaaatgtt
ctaaatggagaagcaaagaaacaattggattcaagtcttgccctttcttctccacgggaa
cctgaatctgaggaaaagccccagaaatctctcaatgagaagcagcaggaaaaccaagac
ctgctaatcaagtgtatttcacaagatctaggattctctgggggcaggcctattgctgct
tgcttgatttacaaatcccttctccaatggaggtcatttgaggttgaaagaaccagtgta
tttgatcgtattattcagacaataggtgcagcaatagaggtccaggataacaatgatgtc
ttgtcctattggttatgtaattcgtctacactgctgttgcttcttcaacgcacactcaaa
gcaagtggagcagctagcttaactccacaaaggcggaggtcaacatcagcttctttattt
gggaggatgtctcaagggcttcgtgcatctccacaaagtgctgggttctcatttcttaat
ggtcgggtgcttggtggactggatgacttgagacaagttgaagccaaatatccagctttg
cttttcaaacagcaactcacagccttccttgagaagatatatggaatgataagagacaat
ttaaagaaagagatttccccattgcttggattgtgtattcaggcacctagaacatcccgg
gcaagtttagtgaagggacgttctcaagctaatgctgttgcacaacaagcattgattgct
cattggcaaagcattgtgaaaagcctgaattattacttgaagataatgaaagcaaaccat
gttccaccattcctagtccgcaaggtgttcactcagatattttcattcatcaatgttcag
ttattcaacagtctccttttgaggcgtgaatgttgctcattcagcaatggggagtttgtt
aagacaggattggccgagttagaaaactggtgccatgaagcaaccgaagagtatgctggc
tcagcttgggatgaactgaggcatatcagacaagcagttggattcctggttatacatcaa
aagcctaaaaaaactttgaaagaaataacaaatgatctttgcccggtacttagcatacaa
caattatacaggatcagtaccatgtactgggatgacaaatatggtacacacagcgtatca
tcagatgttatttcgagcatgagagtaatgatgactgaagattcgaacaatgctgtcagc
agttcgttcttattggatgatgactcaagtattccattcactgtggatgatatttccaag
acaatgcaacaaatagaagtttctgatattgatcctccaccactgattcgtgaaaactca
ggcttctcattcttattaccaagggccgaatga
DBGET
integrated database retrieval system
