Vitis riparia (riverbank grape): 117921681
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Entry
117921681 CDS
T07274
Name
(RefSeq) ABC transporter G family member 42-like
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
117921681
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vri02000
]
117921681
Transporters [BR:
vri02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
117921681
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
AAA_21
ABC_trans_N
ABC2_membrane_3
AAA_29
SMC_N
AAA_18
RsgA_GTPase
AAA_16
AAA_28
AAA
AAA_33
nSTAND3
AAA_15
DO-GTPase2
YozE_SAM_like
AAA_11
Motif
Other DBs
NCBI-GeneID:
117921681
NCBI-ProteinID:
XP_034695525
LinkDB
All DBs
Position
9:complement(3081944..3090713)
Genome browser
AA seq
1438 aa
AA seq
DB search
MDTINGGAESQPPTSFPEKDEEEAVRWGALEKLPTYDRLRTSILKSVVEGESEEKSGRVV
YKEVDVGKLDESDRENFIHRNFKVADDDNEKFLQRLRNRFDRVGVELPKVEVRIEGLRVE
ADCYVGTRALPTLTNTARNMLESALGLFGIILAKRTNHTILRDISSIIKPSRMTLLLGPP
SSGKTTLLLALAGMLDQSLKVNGEITYNGYNFNEFVPQKTSAYISQNNVHLGELTVRETL
DYSTRFQGIGSRRELLTELVKKEEETGIFTDTDVDLFLKACAMEGDESSVITDYILKILG
LDVCKDTLVGNEMMRGISGGQKKRVTSGEMIVGPAKFLLMDEISTGLDSSTTLQIVRCMQ
QIAHFTNSTVFMSLLQPDPETFNLFDDVILLSEGQIVYQGPREHVLHFFQNCGFQCPERK
GTADFLQEVTSKKDQEQYWADSTEPYRYVSVTEFATLFKAFHVGLQLEDDLKLPYDKSQC
HKSALVFKKCTIPKMQLLKTSFDKEWLLLKRTSFVYIFKGIQLIIVAFIVSTVFLRTTLD
VSYDDGPLYIGAIIFSIIINMFNGFAELSLTIARLPVFYKHRDLLFYPAWAFTLPSCLLR
IPISVVESVIWTVIVYYTIGYAPETSRFFKQMLMIFLIQQMASGVFRLIGGVCRSMIVAH
TGGALVLFIVFLLSGFILPLDEIPKWWNWGHWISPLSYGFKAMTINEMLSPRWMKKLGPD
NSTLLGVAVLDNVDVDSESYWYWIGAACLLGFTILFNILFTFSLMYLNPLGKPQAIISEE
AAKEQEPNQGDQTTMSKRHSSSNTRELEKQQVSSQHSPKKTGIKRGMILPFLPLSMSFDN
VNYYVDMPKEMKSQGVTEHRLQLLREVTGTFRPGVLTALMGVSGAGKTTLMDVLAGRKTG
GYIEGDIRISGFPKKQETFARISSYCEQNDIHSPQVTVIESLIYSAFLRLPKEVPDKEKM
IFVNEVMELVELSSIKYALVGLPGVTGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDA
RAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKTGGELIYSGPLGQNSHKI
IEYFEAIPGVLKIKEKYNPAAWMLEVSSASAEVQLGINFADYFIKSPQYQENKAQVKELS
KPPEGAEDLYFPTQYSQSTWGQFKSCLWKQWWTYWRSPEYNLVRYFFSFAAALVVGTIFW
HVGTKRENATDLTMVIGAMYMSVMFVGVNNCMTVQPIVAIERTVFYRERAAGMYHAFPYA
IAQVVAEIPYVFVQATYYSVIVYALACFQWTLAKFFWFLFITFFSFLYFTYYGMMTVSIT
ANHEEASIVASAFVSLFTLFSGFFIPRPRIPKWWVWYYWICPVAWTVYGLIVSQYGDMEE
TINVAGIEPSPSIKWYVESHFGYDLDFMGAVAGILVGFAVFFAFLFGVCIQKLNFQRR
NT seq
4317 nt
NT seq
+upstream
nt +downstream
nt
atggacactatcaatggcggtgcagaaagccagcctcccacttcttttccggagaaagat
gaggaagaggctgtgagatggggtgctttagagaagctgccaacatatgatagactaaga
accagtatactgaagagtgtggtggagggggagagtgaagagaaaagtggtagagtggtc
tacaaggaggttgatgttggaaagcttgatgagagtgacagagagaacttcattcacagg
aattttaaggttgctgatgatgataatgagaagttcctgcagagactcagaaatcgtttt
gatagggttggagtggaactcccaaaagttgaagttagaatcgaggggctaagagtggaa
gctgactgctacgttggaacaagagctcttccaactttaacaaacactgctcgtaacatg
cttgaatcagctcttggtctgtttggaatcattctggccaagagaaccaaccacactatt
ctcagagacatctcttcaatcataaagccatccaggatgactcttttgttagggccccca
tcgtccggcaaaacaacccttctgttggcgctggccggaatgttggatcaaagcttaaag
gtcaatggagaaatcacttacaatgggtacaatttcaatgaattcgtgccacaaaagaca
tctgcatacattagccaaaataatgttcatcttggagagcttaccgttagagaaacttta
gattattcaacaagatttcaaggcattggttctcgacgagaactcttgactgagcttgtg
aagaaagaagaggagactggaatatttaccgacacagacgtagatcttttcttgaaggca
tgcgcaatggaaggagatgaaagcagtgtcattacggactacattctcaagatattaggg
ctggatgtatgtaaggacacgctggttggaaatgagatgatgcgaggaatttctggtgga
caaaagaagagagtaacatcaggggagatgatagtgggacctgcaaagtttctgttgatg
gatgagatatcgacgggcctggacagctccacgactctgcaaatagtgagatgcatgcag
cagatcgcacacttcactaactctactgtatttatgtctctgctacagcctgatcctgag
acgttcaatctctttgatgatgttattctcctatcggagggtcagattgtgtaccagggc
ccaagggagcacgtactccacttcttccagaattgtgggttccagtgccctgagagaaag
ggcactgcggacttcttgcaagaggttacctcaaagaaggatcaagagcagtactgggca
gattccaccgagccctatcgatacgtatcagtcaccgaattcgccactctgttcaaggcc
ttccatgtcgggttgcagctggaggacgacctcaagctcccctatgacaagagccaatgt
cacaaatcagcccttgtcttcaaaaaatgcactatcccaaaaatgcagcttctcaaaaca
tcctttgataaggagtggcttctgctaaagagaacctcatttgtgtacatcttcaagggc
attcagctcatcatcgttgccttcatcgtttcaacagtcttcctcagaaccacacttgat
gtctcatacgatgatggtccactctatataggtgcaatcatattttccatcatcatcaac
atgttcaatggttttgccgagctttccctcaccatcgcgaggctccccgtgttttacaag
catagagaccttcttttctaccctgcatgggctttcaccctcccgagttgtcttctccga
atccccatatcggtcgtggagtctgtaatttggacagtcatagtgtattacaccatagga
tatgctcctgagactagcaggtttttcaagcagatgctgatgatatttctgattcagcaa
atggcttctggggtatttagactcatagggggagtgtgcaggagtatgattgttgcccac
actggtggagcgcttgttcttttcattgttttcttgcttagcggttttatccttcctcta
gatgaaattcctaaatggtggaactgggggcactggatttcacccctatcttatggtttc
aaggccatgactatcaatgaaatgctttctccaaggtggatgaagaaactggggccggac
aattctactctgctgggtgtagcagttctagacaatgtggatgtggactcagagagctac
tggtactggattggagctgcttgtcttttggggttcaccattctcttcaacattctcttc
accttctcgcttatgtacctgaatcctcttgggaagccacaggctataatatctgaagaa
gctgcaaaagaacaggaacccaaccagggagaccaaacaacaatgtcaaagagacattct
tcatccaatacaagagaattggagaagcagcaagtgagtagccaacacagtcctaagaaa
acaggcattaagagaggaatgattcttccatttttacctctatccatgtcctttgacaat
gtaaattactatgtggacatgcccaaggaaatgaagagccaaggagtgacagagcacagg
ctgcagttgcttcgggaagtgacaggaacattcaggccaggagtccttactgcactgatg
ggagttagtggagctggaaagacaacgctgatggatgttctagcaggaagaaaaaccggg
ggttacattgaaggggacattagaatatctgggttccccaagaaacaagaaacttttgca
agaatttccagttactgtgagcagaatgatatccactctccccaagtcactgttattgaa
tctttgatctactcagctttcctaaggctccctaaagaagttcctgacaaagaaaagatg
atttttgtgaatgaagtgatggagctagtcgagctcagcagcataaaatatgcactagtg
gggcttccaggagtcacaggtttatcaacagaacagaggaagaggctcacaatagctgtg
gaacttgttgctaatccttcaatcatctttatggatgaaccaacctctggccttgatgca
agggcagcagctattgtgatgaggacggtgaggaacacagtggacactggaagaactgtt
gtctgcacaatccatcagcccagtatcgatatctttgaagcctttgatgagctgctacta
atgaagacaggaggagagctaatctactcaggaccattgggtcagaattctcataagatt
atcgaatattttgaggcaattcccggtgtcctgaaaatcaaggaaaaatacaatccagcg
gcatggatgctggaagtgagctcagcctcagctgaagtccaacttggaatcaattttgca
gactacttcataaaatcaccccaatatcaagagaacaaagcccaagtaaaggagttgagc
aagccaccagagggagcagaggacctctactttcccacacagtactctcagtctacatgg
gggcagttcaaatcctgcctctggaagcaatggtggacctactggagaagtcctgagtac
aatcttgttcgctacttcttcagctttgcagctgctcttgtggttggcaccatcttctgg
catgttggcactaaaagggagaatgcaactgacctaacaatggtcattggagcaatgtac
atgtctgtcatgtttgtcggagtaaacaactgcatgacagtacagccaattgtagccatc
gaacgaaccgtgttctatcgagaaagagcagctggaatgtaccatgctttcccatatgcc
attgcacaggtggtagctgaaataccatatgttttcgttcaagccacatactattcagtc
atagtgtatgccctggcatgcttccaatggacactggcaaagttcttctggttcctcttc
atcaccttcttctccttcctctacttcacatactacggaatgatgacagtttccatcaca
gcaaatcatgaagaagcatccatagtagcttcagcttttgtttcactcttcaccctcttc
tcaggcttcttcatccccagacctagaattcccaagtggtgggtatggtactattggata
tgcccagtggcgtggacagtatacggattgattgtgtcacagtatggggacatggaggag
accatcaacgtggctgggattgagccaagcccaagcatcaaatggtatgtggaaagccac
tttgggtatgatctggatttcatgggggcagttgctggcattttggtaggctttgctgtc
ttctttgccttcttgtttggggtctgcatccagaaattgaacttccaacggaggtag
DBGET
integrated database retrieval system
