Vitis riparia (riverbank grape): 117921740
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Entry
117921740 CDS
T07274
Name
(RefSeq) probable polygalacturonase At3g15720
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri00040
Pentose and glucuronate interconversions
vri01100
Metabolic pathways
Module
vri_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
117921740
Enzymes [BR:
vri01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
117921740
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pectate_lyase_3
Motif
Other DBs
NCBI-GeneID:
117921740
NCBI-ProteinID:
XP_034695594
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Position
9:complement(6595725..6598983)
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AA seq
346 aa
AA seq
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MASIGLGKIGLNDDDELSTINVRDFGAIGDGTTDDSQAFLKAWKKACGIRAGYVNFIIAS
GKTFLLKPIRFEGPCRASYINIQVLGTITAPKSIYEWGGQSVDNWLIFFRINGLIVNGKG
TINGQGSIWWQQLPKNNLFHPLDGVSNKGPDALSFVGCNNLKLDHLNLINSPRRHVVIFN
INGATISNLNIIAPKESPNTDGIDIGQSTNIQLHYCNIKTGDDCIAIGPSSFYINISNIA
CGPGHGISVGSLGLNGRTDKVEEVQVRDCTFTGTQNGVRIKTWEGGSGYARKILFEGITL
NAADNPIIIDQYYCPNNMCSKQHTRKMLFLHIVSMPMEDLAILFRQ
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atggcctctattggcttaggcaagattggattaaatgacgatgatgagctctcaactatt
aatgtgcgtgattttggagctattggagatggaactacagatgattctcaggcttttcta
aaagcatggaagaaagcttgtggaattcgggcaggctatgtcaattttataattgcaagt
gggaagacattcttgttgaagcctataaggtttgaaggtccatgcagagcttcttatata
aatattcaggttttagggacaattactgcccccaaatcaatatatgaatggggaggtcaa
agcgtggacaattggcttattttcttccgtatcaatgggcttatagtaaatggaaaggga
acgatcaatggccaggggtctatttggtggcaacaacttcctaaaaacaatctattccat
ccattggatggtgttagcaataaaggacccgatgcattgagtttcgttggttgcaataac
ctgaaactcgatcatttgaatcttatcaacagcccaaggagacatgtagtgatattcaac
atcaatggtgcaaccatttccaacctcaacataatagcccctaaagaaagccctaacaca
gacggtatagacattggccagtcaaccaatatccaactccattactgcaacattaaaact
ggtgacgattgtatagctattggtccaagctccttctatattaatattagcaacatagct
tgcggtcctggccatggcataagtgttggaagcttaggattaaatggaaggactgacaaa
gtggaagaagtgcaagtaagagattgtactttcactggaactcagaatggagtaaggatc
aagacatgggagggagggtctggatatgctaggaagatattgttcgaggggattacacta
aatgccgctgataaccccatcatcattgatcaatactactgtcctaataacatgtgctcg
aaacaacatactcgaaagatgttgtttcttcatattgtatcaatgcccatggaagattta
gcgattctgttccgccagtag
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