Vitis riparia (riverbank grape): 117922006
Help
Entry
117922006 CDS
T07274
Name
(RefSeq) sm-like protein LSM1B
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117922006
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vri03019
]
117922006
Messenger RNA biogenesis [BR:
vri03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
117922006
mRNA degradation factors
5'-3' decay
Lsm complex
117922006
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
117922006
NCBI-ProteinID:
XP_034695854
LinkDB
All DBs
Position
9:complement(684109..690289)
Genome browser
AA seq
128 aa
AA seq
DB search
MSWAGPEDIYLSTSLASYLDKKLLVLLRDNRKLLGILRSFDQFANAVLEGACERVIVGDL
YCDIPLGLYVIRGENVVLIGELDLEKEELPPHMTRVSAAEIKRAQKAEREASDLKGTMRK
RMEFLDLD
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgggcaggcccggaagatatctacctatccacatctcttgctagctatcttgac
aagaaacttcttgtactgctgcgagataatcgaaagcttttgggaatacttcgctccttt
gatcaatttgcaaatgccgttcttgagggtgcatgtgagcgagtaattgtcggtgatctt
tattgtgacatccctttaggtttatatgtaattcgaggggagaatgttgttttgattggc
gagctggacttggagaaggaggaacttcccccacatatgactcgagtttcagcagcagag
attaaaagggcacagaaagcagaaagggaggcgtcagatcttaaaggcaccatgaggaaa
agaatggagttcctcgatttggattga
DBGET
integrated database retrieval system