Vitis riparia (riverbank grape): 117922018
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Entry
117922018 CDS
T07274
Name
(RefSeq) uncharacterized protein LOC117922018
KO
K17925
sorting nexin-13
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
vri04990
]
117922018
Domain-containing proteins not elsewhere classified [BR:
vri04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
117922018
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
Motif
Other DBs
NCBI-GeneID:
117922018
NCBI-ProteinID:
XP_034695877
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All DBs
Position
9:4315910..4336667
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AA seq
1154 aa
AA seq
DB search
MSAAKPAVPVRDLVEEAKKRFVFLAICVVGLSYLMSLTSSSVWFNLPAAASLIIIIRYLS
LDFEMRRKAAAYNSKPSSANTVSQKKSPEGPKIIEKFDWRRKVNSSVVEDAIDQFTRHLV
SEWVADLWYSRITPDKEGPEELVQIMNGVLGEISSRARNVNLIDLLTRDLINLICTHLEL
FRAIQGKIVKKQLGSLSIADRDKELKLVLAAENKLHPALFSAEAEHKVLQHLMDGLIVLT
FKPEDLQCSFFRYTVRELLACAVIRPVLNLANPRFINERIESLVISATKANKGGTTAQEA
SQPKPNGSSRISSDHFSRFLDPSVTGVELVQLKNDQSRTAADKTGKDNVNGTHLSKDPLL
SIDARSTRSWGSLPSGPLTGDGRGIQHHRTGGEWGDMLDIVSRRKTQVLAPENFENMWTK
GRNYKKKEDRLTEQATQSSLAGKTDAVNNSKGIHNPKEKDGISKVNSPQSSGVMSGCNDQ
STTKNLFPRADLNISTRSSDPLYQEDDDNALMRLEEVETGSSSSYTTEDEETNAVTGLDS
PVTKVWDGRSNRNLAVSHIRHPLESSEGHMGKKTNKGHVRYQTVPRNHTGRKRSRLSSQK
VHVWQEVERTSFLSGDGQDILNSSKGHEKSEDSSDDSETELLGRVNSGAAASSSAPSISK
SESRSFSVNTLQNSLLADSFLKLRCEVLGANIVKSGSRTFAVYSISVTDINNNNWSIKRR
FRHFEELHRRLKEFPEYNLHLPPKHFLSTGLDMLVIQERCNLLDIYLKKLLQLPTISGSI
EVWDFLSVDSQTYIFSNSISIIETLSVDLHCKPAENSNKVLSFVGPLVNPLPSRRAHLGT
ESKEPPLQTKHNHLVDQGRLTEKGTTYSLVEKPVKECGKPFDDSGSDSDSRVQKNASSMG
NLGKKVKGREGDGLLETSEVLSDAENDPSLPTEWVPPSLSVPILDLVDVIFQLQDGGWIR
RKAFWVAKQVLQLGMGDAFDDWLIEKIQLLRKGSVIASGIKRVEKILWPDGIFLTKHPKR
RRPSVPMSPSQMSPHAQQPAQMCSPKKEDLQKLQEKEHNLVLDELQQQEADRRAKLVYEL
MIDNPPSAIVGLVGRKEYEQCAKDLYFFLQSSVCLKMLAFDLLELLVLSAFPELDDIFKQ
LFEERQKFGEFKAN
NT seq
3465 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcggcaaagccggcggtgccggttcgggacctggtggaggaggccaagaagcgg
tttgtgtttctggcgatatgcgttgtgggtctgtcatatctcatgtctttgacaagctcc
tcagtttggttcaacttgcctgcagctgcttccttaattatcatcatcaggtatttgtct
ctagattttgagatgagaaggaaagcagcagcatacaatagcaaaccatcctcagcaaat
actgtgtctcaaaagaaatctcctgaaggtcctaaaattattgagaagtttgactggagg
aggaaggttaattcctctgttgttgaggatgcaattgatcagttcaccagacatctggtt
tctgagtgggtggctgatctctggtactctcgcataacgcctgataaagagggcccagag
gagctggtgcagatcatgaatggagttcttggagaaatttcatctcgcgcaaggaatgta
aatctcatcgatcttttaacaagggatcttatcaatctcatttgcacccacttggagctt
ttccgtgcaattcaaggaaagattgtgaagaaacagttgggatcattatctattgctgac
cgagataaggaactaaaacttgtcctggctgcagaaaacaaattgcaccctgcactattt
tctgctgaggctgagcacaaggttttgcagcatttgatggatggtctcattgttttaact
ttcaagcctgaagatctgcaatgctctttcttccgttatactgtcagggagcttcttgct
tgtgctgtgattcgaccagtcttaaacttggctaatccaaggtttattaatgaaagaatt
gaatctttagttatttcagcaaccaaggctaataaaggaggtactacagctcaagaggca
tcccagcctaaaccaaatgggtcgtcaaggatctcatctgatcatttttctcggtttcta
gatccttctgttacaggtgttgaactcgtgcagttgaaaaatgaccaatctagaactgct
gcagataaaaccgggaaggacaatgtgaatggaacgcatctttcaaaggacccattgctt
tcgattgatgctcgatccactcgttcatggggttctttgccttctggtcccctaactggt
gatggaaggggtattcaacatcaccgcactggaggtgaatggggtgatatgttagatata
gtttctcgcagaaagactcaagttcttgctccagaaaattttgaaaatatgtggacaaaa
gggagaaactacaaaaagaaggaagatcgattaaccgagcaagccactcaaagttctttg
gcagggaaaactgatgctgtgaataactcaaaggggatacataaccccaaagaaaaggat
ggtataagcaaggttaattctccccagagcagtggtgtcatgtctggatgtaatgatcag
tcaacaacaaaaaatttgttccctcgtgctgacctgaatatatcaactcgctcttcagat
cctctatatcaagaagatgatgataatgctctcatgcgcttggaggaggttgaaaccggg
agcagtagttcctatactactgaagatgaagaaaccaacgctgtgactggtcttgattcc
cctgtcaccaaggtttgggatggaagaagcaacagaaatctcgcggtttctcacattcgt
catccactagaaagttctgaaggccatatgggaaaaaagactaataaagggcatgttcgt
tatcaaacagtacctagaaaccacactggcaggaaaaggtctagattaagtagtcaaaag
gtgcatgtctggcaagaggttgagagaacaagcttcttgtccggagatggacaggatata
ctaaattcttctaaaggacatgaaaagtctgaggattctagtgatgattctgagacagaa
ctgttgggaagagtcaatagtggagcagctgcttcttcatctgcaccttctatttctaaa
tctgaaagccgtagtttttctgttaataccctgcaaaattcattattggcagattctttt
ttgaagttgagatgtgaggttttgggagctaatattgtgaaaagtggctctagaacattt
gctgtttattcaatttctgttaccgatataaataataataactggtcgatcaaaagaagg
ttccgacattttgaagaactgcatcggcgtctcaaagaatttccagagtataatcttcat
ttgccaccaaagcattttctgtcaacaggtttagacatgcttgtcattcaagaacggtgt
aacttgctggacatatatttaaagaagctcttgcaacttcccacaatttcaggatcaatt
gaagtttgggacttccttagtgtagattctcagacatacatcttctcaaattccatttca
atcatcgaaacattgtcagttgacctacattgcaagccagcagaaaatagtaacaaagtt
ctgagttttgttgggcctctagtcaatcctctaccctccaggagagcacatttagggact
gaaagcaaggaacctccattgcagacgaagcataatcatcttgtagatcagggaagattg
acagagaaaggcaccacatattctctggtggaaaagcctgttaaagaatgtggaaagcca
tttgacgattcaggcagtgactcagattctagagtgcaaaagaatgcatcttctatggga
aacttgggaaagaaagttaaaggaagagaaggtgatggtttactagaaacatctgaggtg
ctttctgatgctgaaaatgacccatcccttcctacagagtgggttccaccaagtctaagt
gttcccatattagatttggtagatgttattttccagcttcaagatggtggatggatcagg
cggaaggctttctgggtggccaaacaggtattacaactgggaatgggtgatgcttttgat
gattggttaattgagaaaattcagcttctgcggaagggatcagtgattgcttcagggatc
aagagagttgagaagatactatggcctgacggaatattcttaaccaagcatccaaaaaga
cgaagaccatctgtccccatgagcccatcccaaatgtcacctcatgcccagcaacctgca
caaatgtgttcacctaaaaaggaggatctccagaaactgcaggaaaaggagcacaacttg
gtattggatgagttgcaacaacaagaagcagaccgacgtgcaaagctcgtatatgagcta
atgatagataatccaccatctgctattgtgggccttgttggacgcaaggagtacgaacaa
tgtgctaaggatctctatttctttcttcagtcatctgtttgtttgaagatgctggccttc
gacctcctagagctgctggtattgtcagcatttccagagttggatgacatcttcaagcag
ttgtttgaagaaaggcaaaagtttggagaattcaaagcgaattga
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