Vitis riparia (riverbank grape): 117922065
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Entry
117922065 CDS
T07274
Name
(RefSeq) uncharacterized protein LOC117922065
KO
K11864
BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
117922065
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
vri01002
]
117922065
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vri04121
]
117922065
03036 Chromosome and associated proteins [BR:
vri03036
]
117922065
03400 DNA repair and recombination proteins [BR:
vri03400
]
117922065
Peptidases and inhibitors [BR:
vri01002
]
Metallo peptidases
Family M67
117922065
Ubiquitin system [BR:
vri04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
117922065
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
117922065
BRISC complex
117922065
Chromosome and associated proteins [BR:
vri03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
117922065
DNA repair and recombination proteins [BR:
vri03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
117922065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCC36_C
JAB
Prok-JAB
UPF0172
Motif
Other DBs
NCBI-GeneID:
117922065
NCBI-ProteinID:
XP_034695956
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All DBs
Position
9:5919968..5937158
Genome browser
AA seq
437 aa
AA seq
DB search
MSLTCVKMSEDVWLTCTTHALSTETEEIMGLLLGDIEYSKNGSVTALIWGASPQTRSDRR
KDRVETNPEQLAAASAQAERMTVATGKTTRVIGWYHSHPHITVLPSHVDVRTQAMYQLLD
SGFIGLIFSCFSEDAQKVGRIQVIAFQSTDGKQSNMSRPISLSPVHRSSIIDVESSFSSS
ENAPAKSGPARVESSEQDTGDSRTMALVNKGGGRSSDLGGFFANADANYLGRDKMGGNYH
TNNSENAVVDIDPMDMSESMQEAMHRSNLDMSGAEYVRKEVPLLVFPTLSLLKLDSPLTS
FTDLQRVLYEEERAAYNQAIVQNTRDGKVHPLAFIHHTSTYQASMCKLMEYCLSPAINAL
QDRLKENEIRLAILTDEARTLETEAFKGSESSSGSPRNFQSHGIRGSASFGHRDLYPAES
INLRSVAGPGSRSRRGS
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgacgtgcgtgaagatgagcgaagatgtgtggttgacatgtacgactcatgca
ttgtctactgagactgaagagatcatgggacttcttcttggtgatattgagtactcaaaa
aatgggagtgtgactgcactgatttggggagcatcaccacaaacgaggtctgatcggcgg
aaagaccgagtagagaccaatcctgaacagttggcggctgcatctgctcaggctgagaga
atgactgtggcaacaggaaaaactacaagagtgattgggtggtaccattcacatcctcat
attacagtgcttccttcccatgttgatgtacgaactcaagcaatgtatcaacttttagat
tctgggttcattgggctaatattttcctgttttagtgaagatgctcaaaaggttggaagg
atccaagttatagccttccagtccacagatgggaagcagagcaacatgtcaagacctatt
tctctttcccctgtacacagaagttcaattatagatgttgaatcatcttttagttcctca
gagaatgcacctgcaaaatctggccctgcaagggtggaaagctctgaacaagacactggt
gattcaagaacaatggctttggttaacaagggtgggggaagatcttcagacttggggggt
ttcttcgctaatgctgatgccaactatctagggcgagataaaatgggaggaaactatcat
accaacaactctgagaatgccgttgttgatatagaccccatggatatgtcagaaagtatg
caagaagcaatgcatcgctcaaatttggacatgagtggtgcggagtatgtgagaaaagaa
gtccctctccttgttttcccaaccttgtctcttctcaagctcgattcacctttaacttct
tttacggatttgcaacgtgtactatatgaagaggagagagcagcatacaaccaagccatt
gtacagaatacgagggatgggaaagttcatccactggctttcattcatcatacatccaca
tatcaggcttcgatgtgcaaattgatggagtattgtttaagtcctgccataaatgccctc
caggaccgtttgaaagaaaatgaaatacggctagcaattctgactgatgaagccagaact
ttggagactgaggccttcaaaggaagcgagtcaagctctggatcccctcgtaactttcaa
tctcatggcatccgaggaagtgcttcatttggtcatagagacttatatcctgctgaatcc
attaatttaaggagtgttgctggtcctggtagccggagcagaagagggtcttaa
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