Vitis riparia (riverbank grape): 117922091
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Entry
117922091 CDS
T07274
Name
(RefSeq) nuclear pore complex protein NUP107
KO
K14301
nuclear pore complex protein Nup107
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117922091
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vri03019
]
117922091
03036 Chromosome and associated proteins [BR:
vri03036
]
117922091
Messenger RNA biogenesis [BR:
vri03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
117922091
Chromosome and associated proteins [BR:
vri03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
117922091
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup84_Nup100
Motif
Other DBs
NCBI-GeneID:
117922091
NCBI-ProteinID:
XP_034696000
LinkDB
All DBs
Position
9:complement(576946..604691)
Genome browser
AA seq
1092 aa
AA seq
DB search
MDVEMETSPSYFDPEDLSIREKYRRYGKRQSGSSISPYQENSVSKYSGTRLLFDGQSILR
QPNAALFLEDIKLEVESFEADHSEGTPARAQSASKRRLSIDSHGISEVDAGIDSVRRVGS
HSLKSCKHEDDLLADAGETTFALFASLLDSALQGLLSIPDLILQFETSSRNVSESIRYGS
TTWHRVVEDKLMRQKALLLLDEAASWSLLWHLYGKGNEELPEELILSPTTSHLEACQFVA
NDHTAQLCLRIVQWLEGLASKALDLENKVRGSHVGTYLPSSGIWHHTQRFLKKGVSNSNT
VHHLDFDAPTREHAPLLPDDKKQDESLLEDVWTLLRAGRLEEACDLCRSAGQPWRAATLC
PFGGLDQFPSIESLMKNGKNRTLQAIELESGIGNQWRLWKWASYCASERISEQDGGKYET
AVYAAQCSNLKRMLPICMNWESACWAMAKSWLDIQVDLELARLRPGGTDQFKNYGDIVDG
SPGEGDSESQSSVGPENWPFQVLNQQPRQLSALLQKLHSGDTVHEAVTRGCKEQHRQIEM
NLMVGDIPHLVDLLWSWISPSEDDQNVFRPHGDPQMIRFGAHLVLVLRYLLADQMKDSFK
EKIMAIGDLIVHMYAMFLFSKQHEELVGIYASQLARHRCIDLFVHMMELRLNASLHVKHK
IFLSAIEYLPFSPGDDSKGTFEEIMDSVLSRSREIKLGKYDKSSDVAEQHRLQSLQKAMA
IQWLCFTPPSTITDAKAVSVKLLLRALIHSNILFREFSLISMWRVPAMPVGAHTLLSFLA
EPLKQPPETLHAFEEYNVAENLKEFQDWSEYYSCDATYRNWLKIESEIAEVPPLELSLEE
RQRAIAAAKETLNSSLSLLLRKENPWLVSDENNIYESMEPVFLELHATAVLCLPSGECMC
PDATLCTTLMSALYSSVSEEIVLNRQLMVNVSISPMDNYCIEFVVRCLAVEGDGLGSHEL
CDGGVLGTVMAAGFKGELARFQAGVTIEISRLDAWYSSNDGSLKGPATYIVQGLCRRCCL
PELALRCMQVSVSLVQSGDPPENHDELIELVACPETGFVHLFSQHQLQEFLLLEREYSIY
KMELQEDSLLES
NT seq
3279 nt
NT seq
+upstream
nt +downstream
nt
atggacgttgaaatggagacatctccgagctatttcgatcccgaagatctcagcattcgg
gagaagtatcgcagatatggaaaaaggcagtcaggctcaagcatatcgccctaccaagaa
aattcagtttcaaagtacagtggaaccaggcttttgtttgatggacagagtattctaaga
cagcctaatgctgctctttttcttgaagatattaaactagaagttgagagctttgaagct
gatcactcagaaggcacacctgctagggcacaatctgcttctaaaaggagattatccatt
gatagtcatggaatctcagaggtggatgctggtattgattctgtccgccgagttggaagt
cattcattgaaatcttgcaagcatgaagatgacttactggcagatgctggagagacaacc
tttgctttatttgcatctttacttgattctgctcttcaagggttgttatctatccctgat
ctgatattacaatttgagacgtcttcccgaaatgtttcagagtcaattagatatggttcc
accacatggcatcgggttgtggaggacaaattgatgaggcagaaggctctgctcttgctt
gatgaggctgcttcctggtctcttctgtggcacctatatggaaaaggaaatgaagaactt
cctgaagaactaatcctgtccccaacaacttcacatttggaggcttgccaatttgttgca
aatgatcatacagcccaactatgtcttcggatagttcagtggctagaaggtttagcctcc
aaagcccttgatttggaaaacaaggtgaggggttctcatgttggtacgtaccttcccagc
tctggaatttggcatcatactcaacggtttcttaagaaaggtgtctccaattcaaacact
gtccatcacttggattttgatgctccaacacgtgaacatgctcctctgctacctgatgac
aaaaaacaagatgaatctcttctagaagatgtctggactctattaagggcaggaaggctg
gaagaggcttgtgacctttgccggtctgctggacaaccatggcgtgctgcaactctatgc
ccatttggaggattggaccaatttccttctattgaaagcttgatgaagaatggaaagaat
agaactctgcaagccattgaacttgaaagtggcattggtaaccagtggcgcctttggaaa
tgggcttcctattgtgcatcagagagaatttctgagcaagatggtggaaaatacgaaaca
gctgtatatgctgcccaatgtagtaacctaaagcgcatgcttccaatctgtatgaactgg
gagtctgcatgctgggcaatggccaagtcatggcttgatattcaagtggatttagaacta
gctcgcttgcgacctggtggaactgatcaatttaaaaattatggagatattgttgatggt
agtcctggagaaggtgacagtgagtctcagtcttctgttggaccagaaaattggccattc
caagtcctgaaccaacaaccaaggcagctttctgctcttcttcagaaacttcattcaggt
gacacggtacatgaagctgtgactcgaggctgtaaggagcagcatcgacaaattgagatg
aatctaatggttggggatatcccacacttggtggacctcttatggtcatggatatcacca
tcagaagatgatcaaaatgtcttcaggcctcatggtgatcctcaaatgattcgttttggt
gcacatctagtgcttgtgcttagatatttacttgctgatcaaatgaaggattcttttaaa
gagaaaattatggctattggtgatctcattgtccacatgtatgcaatgtttttattttca
aagcaacatgaggagttggttggtatatatgcttctcagcttgcacggcaccgttgtatt
gacctttttgttcacatgatggaactcaggctgaatgccagtttgcatgtcaaacataaa
atcttcctttctgccatagagtacttgccgttctctccaggggatgactcaaagggtact
tttgaagaaattatggacagtgttctgtcaagatctcgggaaatcaaacttggtaaatat
gataagtcatcagatgtagcagagcagcaccggctgcagagtcttcaaaaagctatggct
attcagtggctttgctttacacccccttctacaattactgatgctaaggctgtcagtgtg
aaacttcttctgcgggctctgatacacagcaacatattgttcagggagttttctctaatt
tctatgtggagggttccagcaatgccagttggtgcacacactttacttagtttccttgct
gaacctttgaagcagcctccagaaactcttcatgcatttgaggagtataatgttgctgag
aatttaaaagaatttcaagattggagtgaatactactcctgtgatgcaacatatcgcaat
tggctcaaaattgaatctgagattgcagaggttcccccccttgaactctcattggaggaa
aggcaaagagccattgcagcagccaaagaaacactaaattcatcactttcgttgctacta
cgaaaggaaaatccttggttggtttcagatgaaaataatatttatgaatcgatggaacct
gtattcctagaattgcatgcaactgcagtgctctgtctgccatctggtgaatgtatgtgt
ccagatgccaccttgtgcaccacattaatgagtgcactgtactcctcagtgagcgaggaa
attgtgttgaatcgccagttaatggtgaatgtttccatctcaccaatggacaattactgc
attgagtttgttgttcgctgcttggcagtggagggtgatggacttggatcacatgaactc
tgtgatggtggtgttcttggtactgtgatggcagctggcttcaaaggggaacttgcacgg
tttcaagctggagttacaatagagatctcccgattagatgcctggtattcaagcaatgat
ggttctctcaaagggccagctacatacattgtgcaaggcctttgtcgtaggtgctgtctt
ccagaacttgctcttcgatgtatgcaggtttctgtttcactagtccagtcaggtgatcca
cctgaaaatcatgatgagttgattgaactagttgcctgccctgaaactgggtttgtccac
ttgtttagtcagcatcagttgcaggaatttttattacttgagagggaatactcaatatac
aaaatggagcttcaggaggattctctgcttgaatcatag
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integrated database retrieval system
