Vitis riparia (riverbank grape): 117922105
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Entry
117922105 CDS
T07274
Name
(RefSeq) pumilio homolog 5
KO
K17943
pumilio RNA-binding family
Organism
vri
Vitis riparia (riverbank grape)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PUF
NABP
PUF_NOP9
Motif
Other DBs
NCBI-GeneID:
117922105
NCBI-ProteinID:
XP_034696017
LinkDB
All DBs
Position
9:complement(22249883..22268169)
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AA seq
1026 aa
AA seq
DB search
MATESPMRMVESSGSTKWPSSMDAATFVSPLKNMAAEELGLLLNGHRLHGDQSDMVPNRS
GSAPPSMEGSFAAIGNLMTQQNNLDSSLASLSSAIENSESEEQLRSDPAYFAYYCSNVNL
NPRLPPPLISRENQRLVRHIGGFGTNWRLTSFDDSGNGSLHLSRSSLSTHKEESEDDRSP
RQTSDDWPESSSAVMPGQKTASSAGRHKSLVDLIQEDFPRTPSPVYNQSRSSSHAATEEL
LDLDVHAISLNDSSLEISKLPEPGPGTVDVSASTCTLDAPAIGLMPNKDDAANSFPSSSY
SDRKHSSLPLPKDEASDKGGAGALVSGGAGLEVSRVESKTKASNVSSLLVAENNANKQEQ
KPSYERNMPPHHPYAQQSSPYKVQGVQAQVISQGMSHPYNGMEKLPHAPPKFSSVEVRPM
MQSPGLTPPLYATAAAYIASGSPFYPNIQPSGLFAPQYGMGGYGLSSALVPQFIGGYPSP
AAIPMPFDATSGPSFNVRTTGASMGESIPHELQNLNKFYGHHGLMLQPSFLDPLHMQYFQ
HPFEDAYGAAGQYGRLPPRGVIGGQDSSVSQKESHVSAYMGDQKLQPPTNGSLSVPSPRK
GGIMGSSYYGSPPNMGVMTQFPASPLSSPILPGSPVGGTNHPGRRNEMRFPQGPIRNVGV
YSGWQGQRGADNFEDPKKHSFLEELKSNNARKFELSDITGRTVEFSVDQHGSRFIQQKLE
NCSGEEKASVFKEVLPHASRLMTDVFGNYVIQKFFEHGTPEQRRELAYQLAGQMIPLSLQ
MYGCRVIQKALEVIELDQKTQLVHELDGHVIRCVRDQNGNHVIQKCIECIPTEKIGFIIS
AFKGQVTVLSSHPYGCRVIQRVLEHCLEVSQSQFIVDEILESAYVLAEDQYGNYVTQHVL
ERGNPHERSQIIGKLTGKIVQMSQHKYASNVIEKCLEYGSTSECELLVEEIIGQSEDNDN
LLVMMKDQFANYVVQKILETSNDKQREILLNRIRVHLNALKKYTYGKHIVARFEQLCCEE
SPAPES
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atggcaactgagagccctatgagaatggtggaaagcagtggatctactaaatggccctct
tccatggatgctgcaacatttgtatcaccattaaagaatatggcagcggaggagttggga
ttacttctgaatggtcataggttgcatggagatcagagtgatatggttccgaatcgaagt
ggtagtgcaccacctagtatggagggttcttttgctgctattgggaatctaatgactcaa
cagaacaatctggattcaagcttggcaagtttaagcagtgctattgagaattctgagtct
gaggaacaactgcggtctgatccagcctattttgcatactactgctctaacgtcaacctg
aatccaaggcttcctccacctcttatttcacgggagaatcaacgcctggtacgccatatt
ggtggttttggcactaattggagattaacttcttttgacgacagtggaaatggatctctg
catttgtctcgtagttccctatctactcacaaggaggagtctgaggatgataggtcaccc
cgacaaacctcagatgattggccagagagcagcagtgcagttatgcctggacagaagaca
gcttcctcagcaggtcgtcataaaagtttggttgatctgatacaggaagactttccccgc
accccatctcctgtatataatcagtctcgttcctcaagccatgcagcaacggaggaacta
cttgatcttgatgttcatgccatttcattaaatgattcctctcttgaaatttcaaaatta
ccggaaccaggtccaggcactgttgatgtttctgcaagcacatgcactctagatgcacct
gctattgggttaatgcccaataaggatgatgcggctaactcttttccaagctcatcatat
tctgatagaaaacacagctcattgcctctacctaaagatgaagcaagcgataaaggtggg
gctggtgcattagttagtgggggcgctggattggaggtttctagagtggagtctaaaaca
aaagcatctaatgtatctagtcttctagttgctgagaataatgcaaataaacaagaacag
aaaccatcgtatgagaggaatatgccgccacaccatccatatgcacaacaaagctctcca
tacaaagttcagggagttcaggctcaagtgatctctcaaggaatgagccacccttataat
ggcatggaaaaacttccccatgcaccccctaagttctcttcagttgaggtacggcctatg
atgcagtctcctggactcacccctcctctgtatgcaacagcagcagcatatattgcttca
ggaagtccattttaccctaatatacagccatcaggcctatttgctccacagtatgggatg
ggtggatatggtctgagttcggcacttgttcctcaatttataggtgggtacccttctcct
gctgctattcctatgccttttgatgctacttctggtccaagctttaatgttcgaacaacc
ggtgcatcaatgggggaaagcattccacatgagttacaaaatctgaacaagttctatggg
catcatgggttaatgctgcaaccttcttttctggatcctcttcacatgcaatactttcag
catccttttgaggacgcatatggtgctgcaggtcagtatggtcggttgccaccaagaggt
gttattgggggtcaagattcctctgtttcacagaaagagtcccatgtcagtgcctacatg
ggtgatcagaaactccagcctccaacaaatggaagcctgagtgttccaagtccaagaaaa
gggggaataatgggcagtagttattatggaagtcctcccaacatgggtgtcatgacacaa
tttccggcctcacctctctctagtccgatactgcctggatctccagtaggtgggaccaat
catccaggacgtagaaatgaaatgaggtttcctcaaggtccaattagaaatgtaggagta
tattctggatggcaaggacaaagaggagcagacaactttgaggatcccaaaaaacactct
tttctcgaagaactcaaatctaacaatgcccggaaatttgagctctctgatattacagga
cgcacagttgaattcagtgttgatcaacatgggagtcggtttattcagcagaagttggag
aattgtagtggtgaagagaaggcatctgttttcaaagaggttcttccacatgcttcaaga
ttaatgactgatgtctttgggaattatgttattcaaaagttttttgaacatgggactcct
gagcagagaagggaacttgcatatcaacttgctggccagatgatacctttaagtctgcaa
atgtatggttgtcgtgtgatccagaaggcccttgaggttattgagcttgatcagaagaca
caacttgtgcacgagcttgatggacatgttatcagatgtgtacgcgaccaaaatgggaat
catgtgattcagaagtgtattgaatgcattcctacagagaaaattggatttattatatct
gcttttaaaggccaagttaccgtgctttctagtcatccctatggttgtcgtgttattcag
agagttttggaacattgtttggaggtgtcacaaagtcaatttatagtggatgagatcttg
gaatctgcttatgttcttgcagaagaccagtatggcaattatgttactcagcatgttttg
gagaggggaaatccccatgaaagaagccaaattatcggcaagttgactggaaaaatcgta
caaatgagtcagcataaatatgcatccaatgttatcgagaaatgtttggagtatggtagt
acttctgaatgtgaactcttggtcgaggagattattggacaatcggaggacaatgataat
ttactggtgatgatgaaggaccagtttgcaaattacgtggtacagaaaattcttgagacg
agcaatgataaacaaagagagatattgctcaaccggataagagttcatcttaatgctttg
aagaaatacacttatggaaaacacatagttgctcgttttgagcaattatgttgtgaagaa
agcccagccccggaatcataa
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