Vitis riparia (riverbank grape): 117922168
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Entry
117922168 CDS
T07274
Name
(RefSeq) pleiotropic drug resistance protein 1-like
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
117922168
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vri02000
]
117922168
Transporters [BR:
vri02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
117922168
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
AAA_21
ABC_trans_N
AAA_29
AAA_16
AAA_25
AAA_28
RsgA_GTPase
ABC_ATPase
Motif
Other DBs
NCBI-GeneID:
117922168
NCBI-ProteinID:
XP_034696093
LinkDB
All DBs
Position
9:complement(5342290..5350214)
Genome browser
AA seq
1454 aa
AA seq
DB search
MATGEIYRAGGSLRKDGSSIWRNSGEEVFSRSSRDEDDEEALKWAALEKLPTYNRMRKGL
LMGSAGEASEVDIHNLGFQEKKNLVERLVKIAEEDNEKFLLKLRNRIDRVGIDLPEIEVR
FEHLTIDAEAHVGSRALPSFIYSAFNQIEDILNTLRILPSRKKKLTILHDVSGIIKPRRM
TLLLGPPSSGKTTLLLALSGKLDSSLKVTGKVTYNGHGMNEFVPQRTATYISQHDTHIGE
MTVRETLAFSARCQGVGDRYDMLAELSRREKAANIKPDPDIDVFMKAVATEGQKENVITD
YTLKILGLEVCADTLVGDQMIRGISGGQRKRVTTGEMLVGPSKALFMDEISTGLDSSTTY
QIVNSLRQTIHILNGTALISLLQPAPETYDLFDDIILLSDSQIVYQGPREDVLDFFESMG
FRCPERKGVADFLQEVTSRKDQQQYWARKDEPYSFVTVKEFAEAFQSFHIGRKLGHELAT
PFDKTKSHPAALKTEKYGVRKKELLDACISREYLLMKRNSFVYIFKLTQLIIMAAISMTI
FLRTEMHKNSTDDGSIYTGALFFTVIMIMFNGMSELAMTIAKLPVFYKQRGLLFYPAWAY
ALPSWILKIPITFVEVAVWVFMSYYVIGFDPNVGRLFKQYLLLVLVNQMASALFRFIAAA
GRNMIVANTFGSFSLLLLFALGGFVLSRENVKKWWIWGYWSSPLMYAQNAIVVNEFLGKS
WSKNSSTDSTESLGVAVLKSRGFFTEAYWYWIGAGALLGFILVFNICYTVALTYLNAFEK
PQAVITEESDNSKTGGKIELSSHRQGSIDQTASTERRDEIGRSISSTSSSVRAEAIAEAR
RNNKKGMVLPFQPLSITFDDIRYSVDMPEEMKSQGVLEDRLELLKGVSGAFRPGVLTALM
GVSGAGKTTLMDVLAGRKTGGYIEGNISISGYPKKQETFARISGYCEQNDIHSPHVTIHE
SLLYSAWLRLPADVDSKTRKMFIEEVMELVELTPLRDALVGLPGVNGLSTEQRKRLTIAV
ELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLL
LKRGGQEIYVGPLGRHSSHLIKYFEGIEGVSKIKDGYNPATWMLEVTTSAQEFLLGVDFT
EIYKNSDLYRRNKDLIKELSQPAPGSKDLYFPTQYSQSFFIQCMACLWKQRRSYWRNPPY
TAVRFFFTTFIALIFGTMFWDLGTKRKKQQDLSNAMGSMYAAVLFLGVQNSSSVQPVVAV
ERTVFYRERAAGMYSAMPYAFAQALVEIPYVFAQAVVYGVIVYAMIGFEWTAAKFFWYLF
FMFFTLLYFTFYGMMAVAATPNQHIAAIVAAAFYGLWNLFSGFIVPRTRIPVWWRWYYWI
CPVAWTLYGLVTSQFGDIQDRFEDTGDTVEQYLNDYFGFEHDFLGVVAAVIVGFTILFLF
IFAFAIKAFNFQRR
NT seq
4365 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgggtgaaatttatagagccggtggtagtttaaggaaggacggttcttccata
tggaggaactctggtgaggaggttttctcccgttcttcaagggatgaagatgatgaggaa
gctctgaaatgggccgccctcgagaaacttcccacctacaatcggatgaggaaaggcttg
ctgatgggttcggcgggtgaggccagtgaagttgatatacacaaccttgggtttcaggaa
aagaagaatttagtggagcggttggtgaaaattgccgaagaggacaatgagaagttcttg
ttgaagctcaggaatcgcatagatagagttgggattgatcttcccgaaattgaagttaga
tttgagcatcttaccattgatgcagaagctcatgtaggaagcagagctttgccttcattc
atttattctgcttttaatcaaattgaggatatcttgaacactcttcggattcttccgagt
agaaagaagaaactcactattcttcacgatgttagtggaatcatcaaacctcgaagaatg
acattgcttttgggtcctccaagttctggaaagaccactctgttattggctttgtccgga
aagcttgattccagtctaaaggttacgggaaaggtgacatacaatggtcatggcatgaat
gaatttgtaccccagagaactgcaacctacatcagccaacatgatacccatataggagaa
atgactgtacgggaaaccttggccttctctgcaagatgccagggtgttggagatcgatat
gacatgttagcagagctctcaagaagagagaaggcagcaaatattaagcctgatcctgat
atcgatgtcttcatgaaggcagtggcaacggaaggccagaaggagaatgtgatcactgac
tatacactgaagattctgggactagaagtctgtgcagacaccttggtaggggatcaaatg
ataaggggtatctctggaggacaaaggaagcgtgtcacaactggggagatgctggttgga
ccatcgaaggcactgttcatggatgagatctctactggcttggatagctcgacaacttat
caaatcgtgaattctctcaggcaaaccatccacattctcaatgggactgctctcatctct
ctcctccagccagcacctgagacttacgatctttttgatgacatcattctcctctctgat
agccagattgtttatcagggtcctcgtgaagacgttcttgacttttttgaatccatgggg
ttcagatgtcctgaaaggaagggtgtggcagacttcctacaagaagtaacatctaggaaa
gatcagcagcagtattgggcacgtaaagatgagccttatagttttgtcacagtcaaggaa
tttgctgaggcattccagtcatttcacattggacggaaactaggacatgagcttgcaact
ccattcgacaagaccaaaagccacccagctgctttgaaaactgaaaaatatggtgttaga
aagaaggaactgttggatgcttgcatttcaagagagtacttgctgatgaagaggaattca
tttgtctatattttcaagctcacccaactcataataatggcagcaatttccatgacaatc
ttcctaagaactgagatgcacaaaaattcaacagatgatggaagcatttacacgggtgct
ttgttcttcactgttatcatgatcatgtttaatggaatgtcagaacttgccatgaccatt
gcaaaacttcctgtcttttacaagcaaagaggcctactattctaccctgcatgggcatat
gctctcccctcatggatcctcaagatccccatcacatttgttgaagttgctgtttgggtg
ttcatgtcttattatgtcattggatttgatccaaatgtgggaaggttgtttaaacaatat
cttctcctcgtgcttgttaatcagatggcatctgcattgtttcgatttattgcagcagct
ggtagaaacatgattgttgcaaacacatttgggtcattttcattacttttgctctttgca
ttgggtggttttgtcctgtcacgagaaaatgtcaagaaatggtggatttggggttactgg
tcttcccctctgatgtatgcacagaacgcaatagtggtaaatgaattccttgggaagagt
tggagcaaaaattcttcaaccgattcaacagaatcccttggagtagcagtattgaagtct
cgcgggttcttcacagaggcatactggtactggataggagctggggcactgcttggattc
attttagtcttcaacatctgttacactgtggctctcacttacctaaatgcatttgagaag
cctcaagctgttataacagaagagtctgacaattccaaaactggaggaaagatcgagtta
tcatcccatagacaaggctcgattgaccaaactgcatccacagagaggagagacgaaatt
gggagaagcatctcatccacatcctcatctgtgagggcagaagccattgctgaggctaga
cgtaacaacaaaaaaggaatggttcttccattccaaccactttctatcacctttgatgat
attagatactcagttgacatgccagaggaaatgaaaagtcaaggtgtccttgaagacaga
ttggagcttctaaagggggtgagtggtgctttcaggcctggtgttcttacagctctgatg
ggtgttagcggtgctggtaaaaccactctcatggatgtactggctggtcggaaaactggt
ggatatattgagggtaacatttctatttctggctacccaaagaagcaagagacttttgct
cgaatttctggatactgtgagcagaatgacatccactctcctcatgttactatccatgag
tccttgctctactctgcttggctgaggttgcctgctgatgtggattctaaaactagaaag
atgttcattgaggaagtcatggagctcgtggaactgaccccattgagggatgcactagtt
gggttgccaggtgtaaatggtctctcaaccgagcagcgcaagaggctgaccattgcagtt
gagcttgtggcaaatccctcaataatattcatggatgagccaacttcagggctagatgca
agagctgctgcaattgttatgagaacagtcaggaacacagtggacacaggaagaacagtt
gtgtgcaccatccatcagccaagtattgacatctttgaagcctttgatgagttgctcctg
ctgaagcgaggaggacaagagatatatgtgggaccactgggtagacattcttctcatctg
ataaagtattttgagggaattgaaggagtgagtaaaatcaaagatggttataaccctgca
acttggatgctggaagttaccacttcggcacaagaattcttgttgggggtggatttcact
gaaatatacaaaaattcggacctatacaggagaaacaaagatttaattaaagaattgagc
caacctgcccctggttcaaaggacctctatttccctactcaatactcccagtccttcttc
atccaatgtatggcatgcttatggaaacagcgtaggtcatattggcgcaatccaccatac
acggcagtgagatttttcttcacaactttcatagccttgatatttgggacaatgttctgg
gatctcggcaccaaaaggaaaaaacaacaagatttgagtaatgcaatgggttctatgtat
gctgctgttctcttccttggggttcaaaattcctcatcggtgcagccagtcgttgcagtt
gaacggacagtcttttacagagaaagagctgcaggaatgtattcagctatgccatatgcc
tttgcacaggctctagttgagataccatatgtctttgcacaagctgtggtgtatggtgtt
atagtttatgcaatgattggatttgaatggacagctgctaagttcttctggtatctgttc
ttcatgttcttcaccttactgtacttcaccttttatggcatgatggctgtggctgccaca
ccaaatcaacatattgctgccatcgttgctgcagcattttatggattatggaacctattt
tcaggttttatagttcctcgaaccagaattccggtgtggtggagatggtactattggata
tgtccagttgcatggactttgtatggattggttacatcgcagtttggagatatacaggac
agatttgaggacacaggtgacacagtggaacaatacttgaatgactattttggattcgaa
catgattttctaggagtggttgcagctgtgattgttgggtttacaatacttttcttattt
atctttgcctttgccattaaggcatttaacttccaaaggcggtaa
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integrated database retrieval system
