Vitis riparia (riverbank grape): 117922291
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Entry
117922291 CDS
T07274
Name
(RefSeq) KH domain-containing protein HEN4
KO
K21444
poly(rC)-binding protein 3/4
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vri03019
]
117922291
Messenger RNA biogenesis [BR:
vri03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
117922291
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH-I_KHDC4-BBP
KH_2
KH_KhpA-B
KH_5
Troponin
Motif
Other DBs
NCBI-GeneID:
117922291
NCBI-ProteinID:
XP_034696261
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All DBs
Position
9:complement(21756904..21768488)
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AA seq
705 aa
AA seq
DB search
MDSSSLPKRLPADSSTVASAEPTAKRRNQPTATSAASAATSSPPTVVAAGAAKPQVLFRI
LCPATKTGGVIGKGGAIIRQFREDTGAKIRIDDSVLGCDERVILIVADAVKSKREASAIC
GAEANDGEESANLSNSSPNPVAVDDDESSPAQQALVRVFERILKVDEEREEKEKKEDLGN
VAVCCRLLAPSNQVGCVLGRGGKIVEKIRQESGAQIRVLPKDHIPACASPGDELIQITGT
FPAVRKALLLVSSCLQDNPRADATNSAAAKPTGGMLHGNGMPGQLDSFPQRGYGSSLHGP
DYHSRGYSSMPGPENIGANHRMVLEEEVVFKLLCHFEKVGSLIGKGGSIIRSLQSETGAS
IKIADAAPDSDERVVVISARENSEQKHSPAQDAVIRVHCRIAEIGFEPGAAVVARLLVHS
QQIGCLLGKGGIIISEMRRATGASIRIFAKEQVPKCGSQNDELVQVIGSLQSVQDALFRI
TSRIRETIFPLKPSISNVNGPPYMSSFLEIPPPMFRPRHDPASPGHYSSPVGVPHGIDRS
AVPGHPLDHQSSFSHGVDRIGPSNLDRAPYPYGGDRPGHGPPFDRPSSSPRMWTPQGVSG
NLRGTDIGSGGLASRNGPPGSGSQAPNITTTTVEVAVPQALLSHVYGENNSNLNQIRQIS
GARVVIQDPRTGSSEGVVVVSGTLDQTRAAQSLVQAFILSEQMTT
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atggactcttcctccctccccaagcgcctccccgccgactcttccaccgtcgcctctgcc
gagcccaccgccaagcggcgtaaccaacccactgccacctccgccgcctccgccgccact
tcatctcctcccaccgtggttgcggcgggggcggccaaaccacaggtcctcttccgcatc
ctctgccccgccaccaagacaggcggcgtcatcggaaagggcggcgccattatacggcag
ttccgggaggacaccggcgcgaagatccgcatagacgactccgtcctcggctgcgacgag
cgcgtcattctcatcgtcgccgatgccgtgaagtccaaaagggaagcgtcggcaatctgc
ggtgccgaggcgaatgatggtgaagaatcggcgaatttgagcaactccagtccgaatcca
gtggcagtagacgatgacgagtcatcgccggcgcagcaggcgctggttagggtttttgag
aggattttgaaggtggatgaggagagggaggagaaggaaaagaaggaagatttaggcaat
gtggcggtctgttgtaggctgctggcgccgagcaatcaggttggttgtgtgctcgggaga
ggagggaagattgtggagaagattaggcaggagagtggagctcagattagggttttgccc
aaagatcacatcccagcttgtgcttcgcctggagatgagttgattcagataactggaacc
tttccagctgtaaggaaagcacttttgttggtttcaagttgtcttcaggataaccctagg
gcagatgcaaccaactcggcggcagccaagccaactggaggcatgcttcatggaaatggt
atgcctggacagctggactcattccctcaacgaggttatggatctagtcttcatggtcct
gattatcattccaggggctattcttctatgccaggccctgaaaatattggtgccaatcac
agaatggtactggaagaggaggtggtatttaaattattgtgccattttgagaaagttggc
agtctgattggaaaaggcggttctataataaggtctttgcaaagtgaaactggtgcatct
atcaagattgctgatgctgcacctgactcagatgaacgggttgttgtgatatctgcacga
gagaattcggagcagaaacattcacctgcgcaggatgctgttatacgagtgcattgtaga
atagcagagattggatttgaacctggtgctgccgttgttgctaggcttcttgttcattca
cagcagataggttgtttattgggtaaaggaggtatcattattagtgaaatgagaagggct
accggtgctagtatacgcatttttgctaaggaacaagttccaaagtgtggttcccaaaat
gatgaactcgtccaggttattggtagtttgcagtctgtacaggatgctttatttcgtatt
acaagcaggattcgagaaaccatattccctctgaaaccatccatttcaaatgttaacggc
ccaccatacatgtcttcttttctagaaatacctccccctatgtttagaccaaggcatgac
ccagcatctcctggtcattactcttcccctgttggagtgccacatgggattgatcgttct
gctgttccaggccacccccttgatcaccagtcctcattttcacacggtgtggatcgtata
ggtccatccaatctggaccgagctccctatccttatggtggtgacagaccaggacatggt
ccacccttcgacagaccatcttcttctccaagaatgtggactcctcagggtgttagcggg
aacctcaggggcactgacattggttcaggcggcttggcttcaagaaacggacctcctgga
agtggaagtcaggcaccgaacattactaccacaactgttgaggtcgctgtccctcaagca
ttgctgagccatgtctatggagagaataacagcaatctgaaccagatcagacagatctct
ggtgcaagggtcgtcattcaagacccaagaactggaagttctgaaggtgtagttgtggta
tctgggacactagaccaaactcgagccgctcagagccttgttcaagccttcatcctctcc
gaacaaatgacaacgtaa
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