Vitis riparia (riverbank grape): 117922451
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Entry
117922451 CDS
T07274
Name
(RefSeq) RING-H2 finger protein ATL18-like
KO
K16282
E3 ubiquitin-protein ligase RHA2 [EC:
2.3.2.27
]
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vri04121
]
117922451
Enzymes [BR:
vri01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117922451
Ubiquitin system [BR:
vri04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117922451
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_5
zf-RING_16
zf-RING_UBOX
zf-ANAPC11
zf_RING_Vps8
zf-C3HC4_3
zf-RING-like
zf-RING_4
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
117922451
NCBI-ProteinID:
XP_034696477
LinkDB
All DBs
Position
1:complement(2263995..2264810)
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AA seq
179 aa
AA seq
DB search
MESSSNMSILPASSALPLSPILMLCFFIFICYKLFPKIIPHPIMSNYIIPTAAHLTWAWD
FLLHYSLFPNSHHNTNVPANGDQGLSLGLYKPEPGSKEAVDCVVCLCKIEEGEEIRELRC
GHMFHRDCLDRWVGHRNGTCPLCRGCLAPPRMVNEAGEELIVFNFCSFSSSSRTVWWLR
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atggaatcatcgtcaaacatgagcattctaccagcaagttcagctcttcctctctccccc
attctgatgctatgcttcttcatcttcatctgctataagctctttcccaagatcatccct
caccccatcatgtccaattacataattccaaccgctgcccatctgacatgggcatgggat
ttcttgcttcactattctctctttcctaattctcatcacaatacgaatgtgccggcaaat
ggtgaccagggactaagcctggggctctacaaacctgagccggggtcgaaggaggcagta
gattgtgtagtgtgcctatgcaagattgaagaaggagaagagataagagagttgaggtgt
ggtcacatgtttcacagagattgcctggacagatgggttggacatagaaacggaacatgt
cccttgtgtcgaggttgtcttgcccctccaagaatggtgaatgaggcgggagaggaactg
atagttttcaacttttgttcattcagttccagtagtcgcactgtgtggtggctgcgctag
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