Vitis riparia (riverbank grape): 117922545
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Entry
117922545 CDS
T07274
Name
(RefSeq) peroxisome biogenesis protein 2
KO
K06664
peroxin-2
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
117922545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vri04121
]
117922545
Ubiquitin system [BR:
vri04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Peripheral membrane proteins
117922545
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Pex2_Pex12
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-RING_2
HTH_52
Siva
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
117922545
NCBI-ProteinID:
XP_034696584
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Position
9:4038814..4045386
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AA seq
346 aa
AA seq
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MEKQALDSSSTASAVAPEDAWVHTYQRLQPQWQSFSLSQQSTIPVSISRVNQVDAARLDI
EISAMLKEQLVKVFSLMKPGMLFQYEPELDAFLEFLIWRFSIWVDKPTPGNGLMNLRYRD
ERTMELRGKVRTGLEGPGLTVAQKIWYCVATVGGQYIWARLQSFSAFRRWGDSEQRSVAR
RAWIMIQRIEGLYKAASFSNLLIFLFTGRYRNLIERALQARLVYGSPNMNRAVSFEYMNR
QLVWNEFSEMLLLLLPLLNSSSIRNFLRPFSKNKSSSSEGDETACPICQASPTIPFLALP
CEHRYCYYCLRTRCAAASSFRCIRCSEPVVAMQRHFGSVSNVVPKQ
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atggagaaacaagccctagattcgtcgtcgacggcatcggcagtagcgccggaagatgcc
tgggttcacacctaccagagattgcagcctcaatggcaatctttctctctttctcagcag
tctacaatcccagtatcaatatccagagttaatcaggttgatgctgcaagattggacatt
gaaatatctgctatgttgaaagaacagttggttaaggtcttctctttgatgaagccagga
atgttatttcaatatgaacctgaacttgatgcttttcttgagtttctcatttggagattc
tcaatttgggtggataagcctactcctggaaatggtctcatgaatttgagatatagagat
gaacggacgatggaattgagaggaaaagtcagaacaggtttggaaggacctggccttact
gttgctcagaagatttggtattgtgttgccactgttggtggtcagtatatttgggcccgt
ttacagtcattctctgcctttcgtagatggggtgattctgagcagaggtcagtggctcgc
cgggcatggattatgattcaacgaatagaaggattatataaagctgcctcattcagcaac
ctgctcatattcctttttacaggaaggtatagaaaccttattgagagagctttacaagca
agacttgtctatggctcccccaatatgaacagagctgttagctttgaatacatgaatcgc
cagttagtgtggaatgaattctcggagatgttgttgttacttcttcctcttctcaattca
tcatcaattagaaattttcttcgcccattctctaagaataagtcttcaagttctgaagga
gatgaaactgcttgccccatttgccaggctagtccaaccattccatttctcgctctacct
tgtgagcacaggtactgttactactgccttcggacgcgctgtgctgcagcttcatcattc
cggtgtatcagatgcagtgagccggttgttgccatgcagcggcattttggttcagtcagc
aacgtagtacccaaacaatga
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