Vitis riparia (riverbank grape): 117922713
Help
Entry
117922713 CDS
T07274
Name
(RefSeq) WD-40 repeat-containing protein MSI4-like
KO
K10752
histone-binding protein RBBP4
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri03082
ATP-dependent chromatin remodeling
vri03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
117922713
03083 Polycomb repressive complex
117922713
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vri03036
]
117922713
Chromosome and associated proteins [BR:
vri03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
117922713
Histone modification proteins
HAT complexes
HATB complex
117922713
HDAC complexes
Sin3A-HDAC complex
117922713
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
117922713
PRC2.2
117922713
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
117922713
Heterochromatin formation proteins
Other heterochromatin formation proteins
117922713
Chromatin remodeling factors
NuRD complex
117922713
NuRF complex
117922713
NuRF complex (fruit fly)
117922713
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
CAF1C_H4-bd
WD40_Prp19
Beta-prop_EIPR1
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_EML
WDR55
EIF3I
Beta-prop_DCAF12
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_SPT8
Beta-prop_WDR35_TULP_N
WD40_RFWD3
Beta-prop_WDR19_1st
ANAPC4_WD40
Motif
Other DBs
NCBI-GeneID:
117922713
NCBI-ProteinID:
XP_034696799
LinkDB
All DBs
Position
9:complement(1860348..1869078)
Genome browser
AA seq
453 aa
AA seq
DB search
MKETSTAGETSISVDERYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQR
LYLSEQTDGSVPNTLVIANCEVVKPRVAAAEHIAQFNEEARSPFVKKFKTIIHPGEVNRI
RELPQNSKIVATHTDSPDVLIWDVETQPNRHAVLGTPESRPDLILTGHKDNAEFALAMCP
TEPLVLSGGKDKSVVLWSIQDHISTLAADPGSAKSTSKAGGGNDKPVESPSIGARGIYQG
HDDTVEDVQFCPLSAQEFCSVGDDSCLILWDARSGTTPAIKVEKAHNADLHCVDWNPHDI
NLILTGSADNTVRMFDRRKLSSGGIGSPIHTFEGHTAAVLCVQWSPDKASIFGSSAEDGI
LNLWNHEKIDKKQAPNAPPGLFFRHAGHRDKVVDFHWNASDPWTIVSVSDDGESTGGGGT
LQIWRMIDLIYRNEDEVLAELDNFKAHLATCSP
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgaaggagacgagcacagccggcgagacgtcgatttcggtggacgagaggtatacccag
tggaagtctctcgttccggtgctctacgactggctggccaaccacaacctcgtctggccc
tccctctcctgccgatggggtccgcaattggagcaagctacgtataagaatcggcaacgg
ctttacctttcagagcagaccgatggcagtgttccgaataccttagttatagcaaactgt
gaagtcgttaaacctagggtagctgccgcagagcatattgctcagttcaacgaggaagcg
cggtcaccctttgtaaagaagttcaaaacaattatacatccaggagaggtgaaccgaatc
agggaactgccacagaatagtaagatagtggccacacacactgacagtcctgatgtcctc
atttgggatgttgaaactcaacctaatcgtcatgctgtattgggaactccagaatctcgt
ccagatttgatattaactgggcataaagataatgcagaatttgctcttgccatgtgtcca
actgaaccattggtgctctctggaggcaaggataagtctgtggtgttgtggagtattcag
gatcacatctcaactttggcagcagatccagggtcagcaaagagtacctctaaggctggt
ggtggtaatgataaacctgtagaaagcccttctataggagcacgtggtatctaccaaggg
catgatgatactgttgaagatgtgcaattctgcccattaagcgcacaggagttctgtagc
gtaggtgatgattcttgccttatcttatgggatgcaagatctggcaccactccagccatc
aaggttgagaaagctcataatgctgatcttcactgtgttgattggaatcctcatgacata
aatcttattctaactgggtcagctgacaatactgttcgcatgtttgatcgccgaaagctt
tcgtctggtggaattggatcaccaatccatacatttgagggccatactgctgctgtcctt
tgtgtacagtggtctccggacaaggcttcaatctttggaagttctgcagaagatggtatc
ttaaacctctggaatcatgaaaagattgataagaagcaagctcctaacgctcctccaggt
ttattcttcagacatgctggccatagggataaggtcgtggacttccattggaatgcatcc
gatccatggacaattgttagcgtatctgatgatggtgaaagtactggtggaggcggtaca
cttcagatatggcggatgatcgatctgatttacaggaacgaagatgaggtgctggctgag
ctcgataacttcaaagctcatttggccacatgctccccctga
DBGET
integrated database retrieval system
